Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010001G10.5 |
| Conread position: | 1235-1650 |
| Cow position: | chr18:8358620-8358200 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 153 |
| Conread position: | 1241-1640 |
| Cow position: | chr18:10761156-10760777 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 1246-1431 |
| Cow position: | chr18:45944440-45944625 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 1246-1648 |
| Cow position: | chr18:8756200-8755800 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 181, 46 |
| Conread position: | 1254-1649 |
| Cow position: | chr18:16112971-16113375 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 1260-1422 |
| Cow position: | chr18:38364244-38364085 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1269-1649 |
| Cow position: | chr18:10675525-10675883 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 1276-1574 |
| Cow position: | chr18:16804409-16804108 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 113 |
| Conread position: | 1288-1649 |
| Cow position: | chr18:23000762-23001120 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 139, 32 |
| Conread position: | 1312-1651 |
| Cow position: | chr18:42157654-42157985 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 1320-1649 |
| Cow position: | chr18:45794691-45794367 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 94 |
| Conread position: | 1325-1638 |
| Cow position: | chr18:17385749-17385446 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 108, 55 |
| Conread position: | 1349-1632 |
| Cow position: | chr18:9590222-9590508 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 1356-1649 |
| Cow position: | chr18:29465171-29465474 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 209 |
| Conread position: | 1468-1638 |
| Cow position: | chr18:30785059-30785231 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1469-1648 |
| Cow position: | chr18:6652010-6652188 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 1471-1632 |
| Cow position: | chr18:49042382-49042550 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1471-1649 |
| Cow position: | chr18:56333580-56333760 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 177 |
| Conread position: | 1471-1651 |
| Cow position: | chr18:55344154-55344335 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 1477-1649 |
| Cow position: | chr18:28595918-28596089 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 1499-1649 |
| Cow position: | chr18:2260378-2260226 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1500-1647 |
| Cow position: | chr18:50743303-50743450 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 91 |
Show alignments to all cow chromosomes.