Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010001G10.5 |
| Conread position: | 169-406 |
| Cow position: | chr19:51788236-51788473 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 176-408 |
| Cow position: | chr19:51960985-51961217 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 173, 194 |
| Conread position: | 193-407 |
| Cow position: | chr19:52141551-52141765 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 157, 177 |
| Conread position: | 533-634 |
| Cow position: | chr19:51963976-51964077 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 802-1057 |
| Cow position: | chr19:51967342-51967602 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 168, 37 |
| Conread position: | 1068-1242 |
| Cow position: | chr19:51967648-51967829 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1230-1638 |
| Cow position: | chr19:51968030-51968441 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 1240-1597 |
| Cow position: | chr19:40394493-40394855 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 1241-1431 |
| Cow position: | chr19:27738-27545 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 1245-1629 |
| Cow position: | chr19:10109764-10109372 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 156 |
| Conread position: | 1269-1650 |
| Cow position: | chr19:7302583-7302961 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 1275-1649 |
| Cow position: | chr19:9566760-9567154 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 1275-1649 |
| Cow position: | chr19:21263068-21262694 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 1334-1543 |
| Cow position: | chr19:28936590-28936802 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 5 |
| Conread position: | 1337-1587 |
| Cow position: | chr19:48936017-48936270 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 1338-1583 |
| Cow position: | chr19:11801482-11801234 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 1339-1639 |
| Cow position: | chr19:44202052-44201744 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 1356-1649 |
| Cow position: | chr19:42213422-42213135 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 73, 30 |
Show alignments to all cow chromosomes.