Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL010001G10.5
        

               Conread position:
               1227-1639
               

               Cow position:
               chr20:37386282-37386685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 196
               

               Conread position:
               1236-1649
               

               Cow position:
               chr20:24124219-24124633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               1240-1649
               

               Cow position:
               chr20:5111950-5112363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               1269-1571
               

               Cow position:
               chr20:32593187-32593483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               1275-1422
               

               Cow position:
               chr20:13402487-13402633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1275-1649
               

               Cow position:
               chr20:2161092-2160714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 120
               

               Conread position:
               1305-1612
               

               Cow position:
               chr20:2898880-2899190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               1320-1649
               

               Cow position:
               chr20:26487402-26487071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               115, 104
               
Show alignments to all cow chromosomes.