Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL010001G10.5
        

               Conread position:
               1241-1584
               

               Cow position:
               chr29:38625830-38625484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               16, 155
               

               Conread position:
               1271-1649
               

               Cow position:
               chr29:20658675-20659055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               132, 84
               

               Conread position:
               1283-1601
               

               Cow position:
               chr29:33631316-33631636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               73, 183
               

               Conread position:
               1295-1656
               

               Cow position:
               chr29:12166657-12167023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               138, 84
               

               Conread position:
               1303-1600
               

               Cow position:
               chr29:38255849-38255552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               1339-1639
               

               Cow position:
               chr29:19509787-19509489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 129
               

               Conread position:
               1344-1616
               

               Cow position:
               chr29:32201697-32201416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               1511-1639
               

               Cow position:
               chr29:41016024-41016151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.