Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010001G10.5 |
| Conread position: | 1217-1648 |
| Cow position: | chr3:72129231-72129657 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 203, 49 |
| Conread position: | 1236-1637 |
| Cow position: | chr3:59495698-59495295 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 1241-1649 |
| Cow position: | chr3:74775776-74775371 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 1245-1649 |
| Cow position: | chr3:40140646-40140240 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 25, 137 |
| Conread position: | 1275-1634 |
| Cow position: | chr3:53156242-53156603 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 1275-1639 |
| Cow position: | chr3:79053090-79053449 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 225, 37 |
| Conread position: | 1275-1649 |
| Cow position: | chr3:15403660-15403280 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 1282-1578 |
| Cow position: | chr3:55124749-55125053 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 142, 117 |
| Conread position: | 1311-1583 |
| Cow position: | chr3:69874251-69873984 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 1318-1422 |
| Cow position: | chr3:40110791-40110688 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1327-1639 |
| Cow position: | chr3:74257470-74257786 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 6, 89 |
| Conread position: | 1330-1640 |
| Cow position: | chr3:64842841-64842524 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 118, 63 |
| Conread position: | 1339-1626 |
| Cow position: | chr3:64746010-64746299 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 1353-1647 |
| Cow position: | chr3:18707129-18706825 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 71, 222 |
| Conread position: | 1412-1636 |
| Cow position: | chr3:72777704-72777929 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 1470-1649 |
| Cow position: | chr3:17601416-17601235 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.