Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL010001G10.5
        

               Conread position:
               1235-1557
               

               Cow position:
               chr6:36666403-36666727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               201, 35
               

               Conread position:
               1283-1632
               

               Cow position:
               chr6:15251716-15251363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               141, 29
               

               Conread position:
               1285-1639
               

               Cow position:
               chr6:49110031-49110390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               139, 161
               

               Conread position:
               1288-1451
               

               Cow position:
               chr6:30522294-30522131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               145, 96
               

               Conread position:
               1300-1581
               

               Cow position:
               chr6:41665890-41666174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               132, 55
               

               Conread position:
               1320-1578
               

               Cow position:
               chr6:39446292-39446552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 137
               

               Conread position:
               1471-1663
               

               Cow position:
               chr6:59942446-59942249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1489-1648
               

               Cow position:
               chr6:32799010-32799171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               
Show alignments to all cow chromosomes.