Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01F070075.5 |
| Conread position: | 68-310 |
| Cow position: | chr3:15054854-15055099 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 70-926 |
| Cow position: | chr3:63005914-63006776 (view UCSC Genome Browser custom track) |
| Alignm length: | 899 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 81-575 |
| Cow position: | chr3:40045711-40046214 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 117, 50 |
| Conread position: | 120-357 |
| Cow position: | chr3:3907739-3907995 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 234 |
| Conread position: | 159-936 |
| Cow position: | chr3:26947873-26947099 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 240-936 |
| Cow position: | chr3:6879092-6879793 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 244-936 |
| Cow position: | chr3:54343280-54344025 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 476 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 247-928 |
| Cow position: | chr3:34094805-34095499 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 205 |
| Conread position: | 261-936 |
| Cow position: | chr3:60211121-60211820 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 437 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 62 |
| Conread position: | 306-753 |
| Cow position: | chr3:14587145-14586667 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 311 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 27, 245 |
| Conread position: | 359-880 |
| Cow position: | chr3:32817109-32816573 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 6 |
| Conread position: | 377-912 |
| Cow position: | chr3:2854999-2855548 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 359 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 435-910 |
| Cow position: | chr3:52865870-52866353 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 492-935 |
| Cow position: | chr3:30928420-30927963 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 493-927 |
| Cow position: | chr3:66636964-66636510 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 20, 337 |
| Conread position: | 495-916 |
| Cow position: | chr3:3908126-3908567 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 248 |
| Conread position: | 496-935 |
| Cow position: | chr3:34397091-34397549 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 17, 243 |
| Conread position: | 497-910 |
| Cow position: | chr3:17950375-17949962 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 291 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 498-916 |
| Cow position: | chr3:15055567-15055982 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 499-910 |
| Cow position: | chr3:3979140-3978716 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 508-936 |
| Cow position: | chr3:39325572-39325133 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 557-852 |
| Cow position: | chr3:56706306-56706615 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 75, 180 |
| Conread position: | 557-918 |
| Cow position: | chr3:2124381-2123999 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 77, 182 |
| Conread position: | 570-927 |
| Cow position: | chr3:61276140-61275774 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 675-927 |
| Cow position: | chr3:66116478-66116723 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 678-877 |
| Cow position: | chr3:6684157-6683957 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 138 |
| Conread position: | 717-936 |
| Cow position: | chr3:25681584-25681808 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 5 |
Show alignments to all cow chromosomes.