Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01F070075.5 |
| Conread position: | 56-357 |
| Cow position: | chr6:4904878-4905193 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 72, 27 |
| Conread position: | 148-595 |
| Cow position: | chr6:58064598-58064145 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 301 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 239-357 |
| Cow position: | chr6:6100815-6100931 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 241-935 |
| Cow position: | chr6:16598582-16597862 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 34 |
| Conread position: | 242-918 |
| Cow position: | chr6:9751830-9752503 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 248-605 |
| Cow position: | chr6:10025892-10026279 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 295-928 |
| Cow position: | chr6:41152181-41151526 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 432 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 365-600 |
| Cow position: | chr6:37476839-37476605 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 113 |
| Conread position: | 368-936 |
| Cow position: | chr6:35421581-35422163 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 409-936 |
| Cow position: | chr6:7181297-7181827 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 359 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 74, 9 |
| Conread position: | 414-935 |
| Cow position: | chr6:12679992-12679470 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 324 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 495-918 |
| Cow position: | chr6:6101019-6101418 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 495-935 |
| Cow position: | chr6:10639449-10639020 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 498-935 |
| Cow position: | chr6:6477579-6478023 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 307 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 498-936 |
| Cow position: | chr6:38231175-38230724 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 305 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 634-936 |
| Cow position: | chr6:10026529-10026831 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 722-918 |
| Cow position: | chr6:50121153-50121352 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 122 |
Show alignments to all cow chromosomes.