Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01A020049.5
        

               Conread position:
               1319-1494
               

               Cow position:
               chr13:28081659-28081487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               124, 61
               

               Conread position:
               1319-1513
               

               Cow position:
               chr13:28605454-28605644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               1319-1524
               

               Cow position:
               chr13:53619941-53619741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               126, 63
               

               Conread position:
               1321-1504
               

               Cow position:
               chr13:53850759-53850578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               122, 60
               

               Conread position:
               1359-1482
               

               Cow position:
               chr13:12699231-12699109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1381-1518
               

               Cow position:
               chr13:20653981-20654116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 11
               
Show alignments to all cow chromosomes.