Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01A020049.5
        

               Conread position:
               10-899
               

               Cow position:
               chr23:9812001-9811114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               890
               

               Alignm identity:
               813
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               869, 0
               

               Conread position:
               1317-1499
               

               Cow position:
               chr23:5426482-5426661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               1317-1501
               

               Cow position:
               chr23:27849045-27849222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               166, 65
               

               Conread position:
               1319-1465
               

               Cow position:
               chr23:22238771-22238629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1319-1491
               

               Cow position:
               chr23:3967509-3967337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               124, 166
               

               Conread position:
               1319-1498
               

               Cow position:
               chr23:8698471-8698649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               124, 64
               

               Conread position:
               1319-1499
               

               Cow position:
               chr23:5451369-5451547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               126, 59
               

               Conread position:
               1319-1504
               

               Cow position:
               chr23:24966412-24966229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               124, 72
               

               Conread position:
               1319-1524
               

               Cow position:
               chr23:25990387-25990189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               126, 63
               

               Conread position:
               1322-1493
               

               Cow position:
               chr23:534281-534445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               123, 58
               
Show alignments to all cow chromosomes.