Cow genome map


           Conread name:
           Ss1.1-Tes1-TES01A020049.5
        

               Conread position:
               1300-1493
               

               Cow position:
               chr9:5104399-5104597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1317-1506
               

               Cow position:
               chr9:41728241-41728060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               1319-1485
               

               Cow position:
               chr9:33597967-33597793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1319-1490
               

               Cow position:
               chr9:34265076-34264899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1319-1504
               

               Cow position:
               chr9:26279188-26279371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               127, 63
               

               Conread position:
               1321-1503
               

               Cow position:
               chr9:6954270-6954449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               1322-1516
               

               Cow position:
               chr9:11506275-11506085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 26
               
Show alignments to all cow chromosomes.