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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010070G10.5
        

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:43175138-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
1-887
               

               
Cow position:
               
chr18:42792022-42792908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
891
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
1-915
               

               
Cow position:
               
chr18:41197793-41198707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
920
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
1-999
               

               
Cow position:
               
chr18:52427514-52428513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1006
               

               
Alignm identity:
               
622
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
1-1038
               

               
Cow position:
               
chr18:52432863-52433901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1042
               

               
Alignm identity:
               
638
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
2-677
               

               
Cow position:
               
chr18:50848806-50849481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
2-683
               

               
Cow position:
               
chr18:52447747-52448428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
2-712
               

               
Cow position:
               
chr18:42744498-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 184
               

               
Conread position:
               
2-729
               

               
Cow position:
               
chr18:51400499-51401226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
2-736
               

               
Cow position:
               
chr18:51752200-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
2-747
               

               
Cow position:
               
chr18:54979947-54980690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
2-782
               

               
Cow position:
               
chr18:42837885-42837106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
2-824
               

               
Cow position:
               
chr18:51789590-51788768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
2-826
               

               
Cow position:
               
chr18:52447579-52448404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
2-831
               

               
Cow position:
               
chr18:51812749-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
2-835
               

               
Cow position:
               
chr18:49032911-49032078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
2-880
               

               
Cow position:
               
chr18:44398388-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
886
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
2-893
               

               
Cow position:
               
chr18:52447495-52448387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
897
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
2-895
               

               
Cow position:
               
chr18:44253840-44252961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
2-966
               

               
Cow position:
               
chr18:42791939-42792903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
970
               

               
Alignm identity:
               
612
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
2-978
               

               
Cow position:
               
chr18:52428020-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
985
               

               
Alignm identity:
               
618
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
2-999
               

               
Cow position:
               
chr18:51839090-51838084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1024
               

               
Alignm identity:
               
588
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
2-1038
               

               
Cow position:
               
chr18:42791267-42792303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1042
               

               
Alignm identity:
               
622
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
2-1038
               

               
Cow position:
               
chr18:52433117-52434153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1042
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
3-712
               

               
Cow position:
               
chr18:51765610-51764901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
6-1000
               

               
Cow position:
               
chr18:41197630-41198624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1001
               

               
Alignm identity:
               
625
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
8-637
               

               
Cow position:
               
chr18:55018273-55018901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
8-993
               

               
Cow position:
               
chr18:54992961-54993944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
998
               

               
Alignm identity:
               
605
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
16-999
               

               
Cow position:
               
chr18:51368285-51367303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
987
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
28-496
               

               
Cow position:
               
chr18:50246324-50246790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
38-537
               

               
Cow position:
               
chr18:49022816-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
38-1039
               

               
Cow position:
               
chr18:33064600-33063598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1006
               

               
Alignm identity:
               
654
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
38-1039
               

               
Cow position:
               
chr18:42791218-42792220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1006
               

               
Alignm identity:
               
615
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
39-956
               

               
Cow position:
               
chr18:43022900-43021982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
923
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
40-384
               

               
Cow position:
               
chr18:14453199-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
220, 229
               

               
Conread position:
               
40-803
               

               
Cow position:
               
chr18:44154026-44153284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
473, 41
               

               
Conread position:
               
40-862
               

               
Cow position:
               
chr18:42744628-42743806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 314
               

               
Conread position:
               
41-579
               

               
Cow position:
               
chr18:43093328-43092791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
304, 297
               

               
Conread position:
               
41-918
               

               
Cow position:
               
chr18:44184880-44184003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 209
               

               
Conread position:
               
41-999
               

               
Cow position:
               
chr18:51765908-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
962
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 172
               

               
Conread position:
               
41-1038
               

               
Cow position:
               
chr18:52447282-52448279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1002
               

               
Alignm identity:
               
645
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
52-863
               

               
Cow position:
               
chr18:56493689-56494503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
55-804
               

               
Cow position:
               
chr18:43175252-43174503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 131
               

               
Conread position:
               
55-999
               

               
Cow position:
               
chr18:42790984-42791928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
951
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
56-723
               

               
Cow position:
               
chr18:42792245-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 202
               

               
Conread position:
               
56-917
               

               
Cow position:
               
chr18:44154262-44153420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 119
               

               
Conread position:
               
56-1039
               

               
Cow position:
               
chr18:50848440-50849423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
989
               

               
Alignm identity:
               
614
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
57-475
               

               
Cow position:
               
chr18:55066752-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
57-885
               

               
Cow position:
               
chr18:50099501-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 77
               

               
Conread position:
               
57-1001
               

               
Cow position:
               
chr18:42675467-42674523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
947
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 133
               

               
Conread position:
               
59-831
               

               
Cow position:
               
chr18:43093646-43092874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 111
               

               
Conread position:
               
59-999
               

               
Cow position:
               
chr18:41197599-41198539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
943
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 364
               

               
Conread position:
               
61-1038
               

               
Cow position:
               
chr18:51765972-51764995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
981
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 120
               

               
Conread position:
               
64-695
               

               
Cow position:
               
chr18:55008754-55009385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
66-630
               

               
Cow position:
               
chr18:40075137-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
66-755
               

               
Cow position:
               
chr18:50848785-50849475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 278
               

               
Conread position:
               
74-885
               

               
Cow position:
               
chr18:56316256-56317067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 163
               

               
Conread position:
               
75-837
               

               
Cow position:
               
chr18:50049012-50048259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
81-1038
               

               
Cow position:
               
chr18:40325000-40324049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
958
               

               
Alignm identity:
               
590
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
83-663
               

               
Cow position:
               
chr18:42827368-42827953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
557, 0
               

               
Conread position:
               
84-819
               

               
Cow position:
               
chr18:52433451-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 239
               

               
Conread position:
               
84-1038
               

               
Cow position:
               
chr18:52428018-52428972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
957
               

               
Alignm identity:
               
595
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 239
               

               
Conread position:
               
88-468
               

               
Cow position:
               
chr18:14453234-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
78, 5
               

               
Conread position:
               
93-625
               

               
Cow position:
               
chr18:42837626-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 93
               

               
Conread position:
               
93-632
               

               
Cow position:
               
chr18:44184492-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 159
               

               
Conread position:
               
93-713
               

               
Cow position:
               
chr18:43022593-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
93-730
               

               
Cow position:
               
chr18:42675011-42674372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
93-797
               

               
Cow position:
               
chr18:44184660-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 103
               

               
Conread position:
               
95-881
               

               
Cow position:
               
chr18:44184742-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 241
               

               
Conread position:
               
95-1000
               

               
Cow position:
               
chr18:50099119-50100024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
916
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
98-765
               

               
Cow position:
               
chr18:43120176-43119509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-978
               

               
Cow position:
               
chr18:52433297-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
884
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 88
               

               
Conread position:
               
98-1038
               

               
Cow position:
               
chr18:42985581-42984641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
950
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
98-1038
               

               
Cow position:
               
chr18:52427780-52428720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
944
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 88
               

               
Conread position:
               
98-1038
               

               
Cow position:
               
chr18:52427948-52428888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
943
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 166
               

               
Conread position:
               
98-1038
               

               
Cow position:
               
chr18:52433129-52434069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
943
               

               
Alignm identity:
               
604
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 88
               

               
Conread position:
               
99-1038
               

               
Cow position:
               
chr18:52447004-52447943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
944
               

               
Alignm identity:
               
592
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 87
               

               
Conread position:
               
100-799
               

               
Cow position:
               
chr18:14454039-14453340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 158
               

               
Conread position:
               
102-1038
               

               
Cow position:
               
chr18:43023088-43022152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
943
               

               
Alignm identity:
               
588
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 151
               

               
Conread position:
               
103-585
               

               
Cow position:
               
chr18:51874208-51874690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
247, 230
               

               
Conread position:
               
103-623
               

               
Cow position:
               
chr18:44240329-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
103-635
               

               
Cow position:
               
chr18:1418070-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 69
               

               
Conread position:
               
103-662
               

               
Cow position:
               
chr18:43120003-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 406
               

               
Conread position:
               
103-665
               

               
Cow position:
               
chr18:40324480-40323919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
103-665
               

               
Cow position:
               
chr18:51812480-51811918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
103-677
               

               
Cow position:
               
chr18:41198231-41198801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 319
               

               
Conread position:
               
103-707
               

               
Cow position:
               
chr18:42985072-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 162
               

               
Conread position:
               
103-727
               

               
Cow position:
               
chr18:14453952-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
583, 577
               

               
Conread position:
               
103-742
               

               
Cow position:
               
chr18:51969409-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 150
               

               
Conread position:
               
103-747
               

               
Cow position:
               
chr18:56434281-56434924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
232, 220
               

               
Conread position:
               
103-749
               

               
Cow position:
               
chr18:51789321-51788675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
103-765
               

               
Cow position:
               
chr18:42960063-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
103-786
               

               
Cow position:
               
chr18:43093518-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 153
               

               
Conread position:
               
103-802
               

               
Cow position:
               
chr18:33093038-33092345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 151
               

               
Conread position:
               
103-824
               

               
Cow position:
               
chr18:51812732-51812011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
103-832
               

               
Cow position:
               
chr18:51789405-51788676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
103-863
               

               
Cow position:
               
chr18:50246061-50246821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
103-877
               

               
Cow position:
               
chr18:42837868-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
103-880
               

               
Cow position:
               
chr18:50059135-50058360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 404
               

               
Conread position:
               
103-885
               

               
Cow position:
               
chr18:40324732-40323950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
103-888
               

               
Cow position:
               
chr18:33064366-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 167
               

               
Conread position:
               
103-895
               

               
Cow position:
               
chr18:51752267-51751479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 166
               

               
Conread position:
               
103-896
               

               
Cow position:
               
chr18:43175288-43174495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 251
               

               
Conread position:
               
103-917
               

               
Cow position:
               
chr18:51368534-51367721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
103-921
               

               
Cow position:
               
chr18:51368030-51367213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 153
               

               
Conread position:
               
103-933
               

               
Cow position:
               
chr18:43120339-43119509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
103-956
               

               
Cow position:
               
chr18:42675253-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
103-956
               

               
Cow position:
               
chr18:42985324-42984471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
103-957
               

               
Cow position:
               
chr18:42744649-42743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
103-964
               

               
Cow position:
               
chr18:44398371-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 151
               

               
Conread position:
               
103-969
               

               
Cow position:
               
chr18:52012375-52011506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 411
               

               
Conread position:
               
103-971
               

               
Cow position:
               
chr18:41949196-41948328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 251
               

               
Conread position:
               
103-975
               

               
Cow position:
               
chr18:51789573-51788701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 227
               

               
Conread position:
               
103-996
               

               
Cow position:
               
chr18:44154299-44153425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
896
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 314
               

               
Conread position:
               
103-999
               

               
Cow position:
               
chr18:41949280-41948384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
900
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 147
               

               
Conread position:
               
103-999
               

               
Cow position:
               
chr18:42960315-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
901
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 231
               

               
Conread position:
               
103-1000
               

               
Cow position:
               
chr18:42790948-42791845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
902
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 220
               

               
Conread position:
               
103-1000
               

               
Cow position:
               
chr18:50083350-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
903
               

               
Alignm identity:
               
582
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
103-1000
               

               
Cow position:
               
chr18:50099295-50100192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
903
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
103-1009
               

               
Cow position:
               
chr18:49021635-49022530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
909
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 251
               

               
Conread position:
               
103-1031
               

               
Cow position:
               
chr18:42791872-42792800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
931
               

               
Alignm identity:
               
589
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:33064618-33063683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
943
               

               
Alignm identity:
               
624
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 419
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:33064786-33063851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
942
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 491
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:42675337-42674402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
939
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 151
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:42791200-42792135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
941
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 240
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:42791704-42792639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
941
               

               
Alignm identity:
               
597
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 249
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:42985408-42984473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
941
               

               
Alignm identity:
               
592
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 66
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:43022919-43021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
940
               

               
Alignm identity:
               
591
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 251
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:43175456-43174521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
943
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 320
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:44239909-44240844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
942
               

               
Alignm identity:
               
590
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 83
               

               
Conread position:
               
103-1038
               

               
Cow position:
               
chr18:51766014-51765079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
942
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 231
               

               
Conread position:
               
103-1056
               

               
Cow position:
               
chr18:52447092-52448044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
955
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
103-1057
               

               
Cow position:
               
chr18:44184902-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
959
               

               
Alignm identity:
               
597
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 147
               

               
Conread position:
               
104-491
               

               
Cow position:
               
chr18:1418239-1418628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
375, 0
               

               
Conread position:
               
104-558
               

               
Cow position:
               
chr18:55523881-55524335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
104-632
               

               
Cow position:
               
chr18:50281827-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
304, 321
               

               
Conread position:
               
104-635
               

               
Cow position:
               
chr18:44398034-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 402
               

               
Conread position:
               
104-697
               

               
Cow position:
               
chr18:49032641-49032048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 408
               

               
Conread position:
               
104-726
               

               
Cow position:
               
chr18:55066957-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-774
               

               
Cow position:
               
chr18:53560163-53560829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
611, 0
               

               
Conread position:
               
104-779
               

               
Cow position:
               
chr18:55067041-55066366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-780
               

               
Cow position:
               
chr18:49032725-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 30
               

               
Conread position:
               
104-865
               

               
Cow position:
               
chr18:50048902-50048147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
155, 143
               

               
Conread position:
               
104-920
               

               
Cow position:
               
chr18:54967689-54968503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
104-922
               

               
Cow position:
               
chr18:50848656-50849474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 162
               

               
Conread position:
               
104-968
               

               
Cow position:
               
chr18:42724771-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
104-1000
               

               
Cow position:
               
chr18:49032977-49032081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
603
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
104-1000
               

               
Cow position:
               
chr18:50848404-50849300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
901
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
104-1031
               

               
Cow position:
               
chr18:52447429-52448357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
932
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 152
               

               
Conread position:
               
104-1039
               

               
Cow position:
               
chr18:49033313-49032378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
937
               

               
Alignm identity:
               
622
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 405
               

               
Conread position:
               
104-1039
               

               
Cow position:
               
chr18:50848236-50849171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
939
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
104-1039
               

               
Cow position:
               
chr18:53587014-53586079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
939
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
479, 493
               

               
Conread position:
               
104-1040
               

               
Cow position:
               
chr18:53586930-53585994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
943
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 166
               

               
Conread position:
               
105-711
               

               
Cow position:
               
chr18:1417988-1418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
105-1008
               

               
Cow position:
               
chr18:41197561-41198464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
905
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 404
               

               
Conread position:
               
105-1014
               

               
Cow position:
               
chr18:42791622-42792531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
105-1038
               

               
Cow position:
               
chr18:51812899-51811965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
935
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
105-1039
               

               
Cow position:
               
chr18:50059721-50058787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
941
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 493
               

               
Conread position:
               
105-1039
               

               
Cow position:
               
chr18:53587098-53586163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
940
               

               
Alignm identity:
               
595
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 166
               

               
Conread position:
               
106-463
               

               
Cow position:
               
chr18:40075346-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
106-1004
               

               
Cow position:
               
chr18:40324813-40323916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
903
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
106-1038
               

               
Cow position:
               
chr18:42985489-42984557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
938
               

               
Alignm identity:
               
588
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 141
               

               
Conread position:
               
106-1038
               

               
Cow position:
               
chr18:43093839-43092919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
938
               

               
Alignm identity:
               
587
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 112
               

               
Conread position:
               
106-1038
               

               
Cow position:
               
chr18:52446927-52447859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
934
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 81
               

               
Conread position:
               
108-1038
               

               
Cow position:
               
chr18:50848156-50849086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
936
               

               
Alignm identity:
               
587
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 174
               

               
Conread position:
               
109-1038
               

               
Cow position:
               
chr18:43022997-43022068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
936
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
111-722
               

               
Cow position:
               
chr18:44184558-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 305
               

               
Conread position:
               
111-958
               

               
Cow position:
               
chr18:56493665-56494515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
111-1039
               

               
Cow position:
               
chr18:40306329-40307257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
934
               

               
Alignm identity:
               
588
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 398
               

               
Conread position:
               
112-650
               

               
Cow position:
               
chr18:14453292-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
294, 30
               

               
Conread position:
               
112-825
               

               
Cow position:
               
chr18:51969334-51970036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 141
               

               
Conread position:
               
118-800
               

               
Cow position:
               
chr18:42724590-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
118-999
               

               
Cow position:
               
chr18:55523391-55524271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 227
               

               
Conread position:
               
118-1034
               

               
Cow position:
               
chr18:56247992-56247076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
933
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 97
               

               
Conread position:
               
118-1038
               

               
Cow position:
               
chr18:41949349-41948429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
922
               

               
Alignm identity:
               
592
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
895, 900
               

               
Conread position:
               
118-1049
               

               
Cow position:
               
chr18:56316048-56316979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
933
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
466, 454
               

               
Conread position:
               
119-665
               

               
Cow position:
               
chr18:50246329-50246872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
119-1038
               

               
Cow position:
               
chr18:56329767-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
920
               

               
Alignm identity:
               
641
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-1032
               

               
Cow position:
               
chr18:56248236-56247328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
928
               

               
Alignm identity:
               
583
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 10
               

               
Conread position:
               
121-1046
               

               
Cow position:
               
chr18:44398437-44397512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
927
               

               
Alignm identity:
               
606
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 388
               

               
Conread position:
               
122-832
               

               
Cow position:
               
chr18:51839559-51838848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 395
               

               
Conread position:
               
123-1046
               

               
Cow position:
               
chr18:42724836-42723913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
932
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 214
               

               
Conread position:
               
124-714
               

               
Cow position:
               
chr18:50295361-50295947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
509, 0
               

               
Conread position:
               
125-748
               

               
Cow position:
               
chr18:50022058-50021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
125-1038
               

               
Cow position:
               
chr18:51789635-51788722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
919
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 285
               

               
Conread position:
               
131-911
               

               
Cow position:
               
chr18:51400376-51401156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 117
               

               
Conread position:
               
132-624
               

               
Cow position:
               
chr18:56329334-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 122
               

               
Conread position:
               
132-657
               

               
Cow position:
               
chr18:50271642-50272167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 376
               

               
Conread position:
               
132-665
               

               
Cow position:
               
chr18:51874155-51874686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
219, 32
               

               
Conread position:
               
132-672
               

               
Cow position:
               
chr18:51839380-51838840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-744
               

               
Cow position:
               
chr18:51400545-51401157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 279
               

               
Conread position:
               
132-799
               

               
Cow position:
               
chr18:53586650-53585985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 128
               

               
Conread position:
               
132-1011
               

               
Cow position:
               
chr18:51813039-51812160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
887
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
132-1015
               

               
Cow position:
               
chr18:51789880-51788997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
132-1039
               

               
Cow position:
               
chr18:56330006-56329099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
909
               

               
Alignm identity:
               
619
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
450, 443
               

               
Conread position:
               
135-732
               

               
Cow position:
               
chr18:53498576-53499165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
135-789
               

               
Cow position:
               
chr18:55008575-55009229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 196
               

               
Conread position:
               
135-887
               

               
Cow position:
               
chr18:43167808-43168558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 267
               

               
Conread position:
               
135-979
               

               
Cow position:
               
chr18:55523492-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
135-1000
               

               
Cow position:
               
chr18:51789793-51788928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
136-1003
               

               
Cow position:
               
chr18:50083299-50084166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 105
               

               
Conread position:
               
136-1045
               

               
Cow position:
               
chr18:56316150-56317058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
912
               

               
Alignm identity:
               
595
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
731, 741
               

               
Conread position:
               
137-561
               

               
Cow position:
               
chr18:42792494-42792918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-633
               

               
Cow position:
               
chr18:56391329-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 198
               

               
Conread position:
               
137-665
               

               
Cow position:
               
chr18:51969527-51970044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
137-682
               

               
Cow position:
               
chr18:52433672-52434217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
138, 113
               

               
Conread position:
               
137-695
               

               
Cow position:
               
chr18:53509592-53510154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
124, 116
               

               
Conread position:
               
137-726
               

               
Cow position:
               
chr18:53586561-53585972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 123
               

               
Conread position:
               
137-799
               

               
Cow position:
               
chr18:40075041-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
137-808
               

               
Cow position:
               
chr18:50099665-50100336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
137-813
               

               
Cow position:
               
chr18:1417936-1418612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 271
               

               
Conread position:
               
137-825
               

               
Cow position:
               
chr18:56433989-56434667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 34
               

               
Conread position:
               
137-836
               

               
Cow position:
               
chr18:50271479-50272177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
137-886
               

               
Cow position:
               
chr18:41198013-41198764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
137-918
               

               
Cow position:
               
chr18:33093088-33092313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 123
               

               
Conread position:
               
137-992
               

               
Cow position:
               
chr18:53610533-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
137-999
               

               
Cow position:
               
chr18:49022414-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
137-999
               

               
Cow position:
               
chr18:51812782-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-1000
               

               
Cow position:
               
chr18:51839123-51838246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
885
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
249, 475
               

               
Conread position:
               
137-1007
               

               
Cow position:
               
chr18:50049209-50048335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
882
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 187
               

               
Conread position:
               
137-1007
               

               
Cow position:
               
chr18:50059269-50058401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
768, 0
               

               
Conread position:
               
137-1030
               

               
Cow position:
               
chr18:49021585-49022467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
904
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 122
               

               
Conread position:
               
137-1038
               

               
Cow position:
               
chr18:41197509-41198410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
903
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 376
               

               
Conread position:
               
137-1038
               

               
Cow position:
               
chr18:56248141-56247238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
913
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 246
               

               
Conread position:
               
137-1039
               

               
Cow position:
               
chr18:49022005-49022894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
911
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 103
               

               
Conread position:
               
137-1039
               

               
Cow position:
               
chr18:53559860-53560762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
618, 628
               

               
Conread position:
               
137-1039
               

               
Cow position:
               
chr18:56330085-56329183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
617
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 280
               

               
Conread position:
               
137-1059
               

               
Cow position:
               
chr18:33064836-33063916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
924
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 117
               

               
Conread position:
               
139-999
               

               
Cow position:
               
chr18:53498073-53498938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 300
               

               
Conread position:
               
141-447
               

               
Cow position:
               
chr18:50083976-50084282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr18:56494202-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
141-637
               

               
Cow position:
               
chr18:53571833-53572316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
244, 173
               

               
Conread position:
               
141-674
               

               
Cow position:
               
chr18:56128731-56129261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
434, 397
               

               
Conread position:
               
141-993
               

               
Cow position:
               
chr18:54992842-54993694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 113
               

               
Conread position:
               
141-1000
               

               
Cow position:
               
chr18:56128143-56129002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
708, 701
               

               
Conread position:
               
141-1039
               

               
Cow position:
               
chr18:42791994-42792892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
900
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
704, 708
               

               
Conread position:
               
141-1056
               

               
Cow position:
               
chr18:53559696-53560610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
921
               

               
Alignm identity:
               
582
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 129
               

               
Conread position:
               
141-1057
               

               
Cow position:
               
chr18:50059601-50058687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
919
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 431
               

               
Conread position:
               
144-452
               

               
Cow position:
               
chr18:56267435-56267127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
278, 271
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr18:55497345-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
144-1046
               

               
Cow position:
               
chr18:49022337-49023237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
910
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 262
               

               
Conread position:
               
145-703
               

               
Cow position:
               
chr18:50281784-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
146-378
               

               
Cow position:
               
chr18:56267349-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-550
               

               
Cow position:
               
chr18:56316664-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
330, 335
               

               
Conread position:
               
146-559
               

               
Cow position:
               
chr18:55066747-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-627
               

               
Cow position:
               
chr18:43048701-43048222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
146-710
               

               
Cow position:
               
chr18:40306784-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 272
               

               
Conread position:
               
146-712
               

               
Cow position:
               
chr18:55497595-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 135
               

               
Conread position:
               
146-738
               

               
Cow position:
               
chr18:55018243-55018837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
146-744
               

               
Cow position:
               
chr18:50021953-50021354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
116, 101
               

               
Conread position:
               
146-789
               

               
Cow position:
               
chr18:55497679-55497036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
146-798
               

               
Cow position:
               
chr18:50281701-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
429, 437
               

               
Conread position:
               
146-803
               

               
Cow position:
               
chr18:56247702-56247057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 121
               

               
Conread position:
               
146-806
               

               
Cow position:
               
chr18:53635513-53634855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
513, 480
               

               
Conread position:
               
146-809
               

               
Cow position:
               
chr18:56128652-56129313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
628, 480
               

               
Conread position:
               
146-810
               

               
Cow position:
               
chr18:40086319-40085664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 111
               

               
Conread position:
               
146-814
               

               
Cow position:
               
chr18:55523671-55524339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 110
               

               
Conread position:
               
146-821
               

               
Cow position:
               
chr18:44154340-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
146-822
               

               
Cow position:
               
chr18:53509349-53510023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 205
               

               
Conread position:
               
146-825
               

               
Cow position:
               
chr18:51400475-51401154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
146-825
               

               
Cow position:
               
chr18:55067083-55066404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 114
               

               
Conread position:
               
146-831
               

               
Cow position:
               
chr18:54966894-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 367
               

               
Conread position:
               
146-851
               

               
Cow position:
               
chr18:56493871-56494575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 124
               

               
Conread position:
               
146-852
               

               
Cow position:
               
chr18:50246188-50246889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
146-854
               

               
Cow position:
               
chr18:50083729-50084439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 363
               

               
Conread position:
               
146-866
               

               
Cow position:
               
chr18:50295299-50296016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
434, 445
               

               
Conread position:
               
146-892
               

               
Cow position:
               
chr18:40074966-40075711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 110
               

               
Conread position:
               
146-915
               

               
Cow position:
               
chr18:50099506-50100275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
146-915
               

               
Cow position:
               
chr18:50246020-50246789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
146-918
               

               
Cow position:
               
chr18:51969288-51970045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
146-919
               

               
Cow position:
               
chr18:53525719-53526490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
146-956
               

               
Cow position:
               
chr18:42837909-42837099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
813
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 118
               

               
Conread position:
               
146-958
               

               
Cow position:
               
chr18:40306532-40307344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
146-958
               

               
Cow position:
               
chr18:49022507-49023317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 89
               

               
Conread position:
               
146-964
               

               
Cow position:
               
chr18:56329656-56328838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 192
               

               
Conread position:
               
146-967
               

               
Cow position:
               
chr18:53586804-53585985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 281
               

               
Conread position:
               
146-968
               

               
Cow position:
               
chr18:42693685-42692868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 264
               

               
Conread position:
               
146-972
               

               
Cow position:
               
chr18:33064407-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 204
               

               
Conread position:
               
146-988
               

               
Cow position:
               
chr18:51400307-51401149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
146-989
               

               
Cow position:
               
chr18:42694021-42693179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 277
               

               
Conread position:
               
146-993
               

               
Cow position:
               
chr18:33064911-33064064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 260
               

               
Conread position:
               
146-993
               

               
Cow position:
               
chr18:53497999-53498849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 18
               

               
Conread position:
               
146-993
               

               
Cow position:
               
chr18:54967062-54967906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 268
               

               
Conread position:
               
146-993
               

               
Cow position:
               
chr18:54979419-54980266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
146-993
               

               
Cow position:
               
chr18:54992679-54993526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
146-994
               

               
Cow position:
               
chr18:49021093-49021938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 165
               

               
Conread position:
               
146-994
               

               
Cow position:
               
chr18:54967398-54968241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
146-997
               

               
Cow position:
               
chr18:53635849-53634999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
628, 623
               

               
Conread position:
               
146-999
               

               
Cow position:
               
chr18:40324857-40324004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
146-999
               

               
Cow position:
               
chr18:42744690-42743837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
146-999
               

               
Cow position:
               
chr18:50022376-50021517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 197
               

               
Conread position:
               
146-1000
               

               
Cow position:
               
chr18:43093643-43092790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 371
               

               
Conread position:
               
146-1000
               

               
Cow position:
               
chr18:50022292-50021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 113
               

               
Conread position:
               
146-1000
               

               
Cow position:
               
chr18:50099002-50099856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 184
               

               
Conread position:
               
146-1000
               

               
Cow position:
               
chr18:50099422-50100276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
146-1000
               

               
Cow position:
               
chr18:50848362-50849216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 191
               

               
Conread position:
               
146-1000
               

               
Cow position:
               
chr18:53636017-53635163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
621, 615
               

               
Conread position:
               
146-1001
               

               
Cow position:
               
chr18:33064659-33063804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
146-1001
               

               
Cow position:
               
chr18:50059428-50058573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 124
               

               
Conread position:
               
146-1015
               

               
Cow position:
               
chr18:53559953-53560818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
750, 757
               

               
Conread position:
               
146-1038
               

               
Cow position:
               
chr18:42791159-42792051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
900
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
146-1038
               

               
Cow position:
               
chr18:44253864-44252986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 188
               

               
Conread position:
               
146-1038
               

               
Cow position:
               
chr18:50059512-50058620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
898
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 124
               

               
Conread position:
               
146-1038
               

               
Cow position:
               
chr18:53559785-53560677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
895
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
720, 724
               

               
Conread position:
               
146-1038
               

               
Cow position:
               
chr18:53635933-53635041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
893
               

               
Alignm identity:
               
589
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-1038
               

               
Cow position:
               
chr18:55017907-55018800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 208
               

               
Conread position:
               
146-1038
               

               
Cow position:
               
chr18:56128232-56129124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
894
               

               
Alignm identity:
               
594
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:40306280-40307173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
897
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 272
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:40306448-40307341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
895
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
793, 781
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:43175581-43174688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
898
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 208
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:49033355-49032462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
896
               

               
Alignm identity:
               
608
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 192
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:54967650-54968538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:54979587-54980480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
901
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 268
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:54992931-54993824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
902
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:56329824-56328931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
625
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 192
               

               
Conread position:
               
146-1039
               

               
Cow position:
               
chr18:56329908-56329015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
896
               

               
Alignm identity:
               
621
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 371
               

               
Conread position:
               
146-1050
               

               
Cow position:
               
chr18:49033103-49032200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
908
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 191
               

               
Conread position:
               
146-1056
               

               
Cow position:
               
chr18:40306196-40307105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
911
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
894, 0
               

               
Conread position:
               
146-1056
               

               
Cow position:
               
chr18:49022255-49023162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
915
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 270
               

               
Conread position:
               
146-1058
               

               
Cow position:
               
chr18:56128316-56129225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
604
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
628, 623
               

               
Conread position:
               
146-1059
               

               
Cow position:
               
chr18:55523335-55524247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
916
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
146-1107
               

               
Cow position:
               
chr18:56330160-56329201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
966
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
147-863
               

               
Cow position:
               
chr18:50295216-50295930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 154
               

               
Conread position:
               
147-872
               

               
Cow position:
               
chr18:49022590-49023317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 453
               

               
Conread position:
               
147-881
               

               
Cow position:
               
chr18:1417862-1418598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 264
               

               
Conread position:
               
147-999
               

               
Cow position:
               
chr18:51368070-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
147-1001
               

               
Cow position:
               
chr18:50098919-50099773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
148-916
               

               
Cow position:
               
chr18:51752387-51751622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 59
               

               
Conread position:
               
148-1000
               

               
Cow position:
               
chr18:42791581-42792433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 262
               

               
Conread position:
               
148-1039
               

               
Cow position:
               
chr18:43167653-43168544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
894
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
150-798
               

               
Cow position:
               
chr18:50031035-50030389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 99
               

               
Conread position:
               
150-993
               

               
Cow position:
               
chr18:55017746-55018586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
848
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 33
               

               
Conread position:
               
152-499
               

               
Cow position:
               
chr18:55442300-55442646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 19
               

               
Conread position:
               
152-997
               

               
Cow position:
               
chr18:52012410-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 104
               

               
Conread position:
               
157-717
               

               
Cow position:
               
chr18:56391393-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 258
               

               
Conread position:
               
167-832
               

               
Cow position:
               
chr18:50281639-50282303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
172-1038
               

               
Cow position:
               
chr18:42790935-42791799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 8
               

               
Conread position:
               
173-1057
               

               
Cow position:
               
chr18:42694162-42693279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 147
               

               
Conread position:
               
174-993
               

               
Cow position:
               
chr18:49032991-49032172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-1056
               

               
Cow position:
               
chr18:49021958-49022826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
888
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 213
               

               
Conread position:
               
175-1039
               

               
Cow position:
               
chr18:40086542-40085687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
175-1047
               

               
Cow position:
               
chr18:42694076-42693206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 145
               

               
Conread position:
               
176-797
               

               
Cow position:
               
chr18:50083675-50084297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
609, 0
               

               
Conread position:
               
176-1039
               

               
Cow position:
               
chr18:49033157-49032294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 102
               

               
Conread position:
               
180-1056
               

               
Cow position:
               
chr18:50848144-50849019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 158
               

               
Conread position:
               
183-885
               

               
Cow position:
               
chr18:56391535-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
479, 472
               

               
Conread position:
               
183-929
               

               
Cow position:
               
chr18:53509302-53510047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 152
               

               
Conread position:
               
184-546
               

               
Cow position:
               
chr18:56267479-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-598
               

               
Cow position:
               
chr18:51367613-51367200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
106, 99
               

               
Conread position:
               
185-725
               

               
Cow position:
               
chr18:54993558-54994096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
185-779
               

               
Cow position:
               
chr18:55008793-55009385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
185-823
               

               
Cow position:
               
chr18:54967938-54968575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
185-831
               

               
Cow position:
               
chr18:51874045-51874684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
185-871
               

               
Cow position:
               
chr18:54967854-54968540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
185-990
               

               
Cow position:
               
chr18:54992802-54993607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
813
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
185-993
               

               
Cow position:
               
chr18:54979542-54980350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
813
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 391
               

               
Conread position:
               
185-999
               

               
Cow position:
               
chr18:56434111-56434925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
185-1039
               

               
Cow position:
               
chr18:40086870-40086016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 106
               

               
Conread position:
               
189-755
               

               
Cow position:
               
chr18:42827390-42827961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
476, 480
               

               
Conread position:
               
189-1038
               

               
Cow position:
               
chr18:53636058-53635209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
194-1042
               

               
Cow position:
               
chr18:50245986-50246832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
195-712
               

               
Cow position:
               
chr18:43048736-43048221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 376
               

               
Conread position:
               
195-748
               

               
Cow position:
               
chr18:22634632-22635184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 128
               

               
Conread position:
               
195-916
               

               
Cow position:
               
chr18:51765670-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 142
               

               
Conread position:
               
195-990
               

               
Cow position:
               
chr18:53509230-53510023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
195-994
               

               
Cow position:
               
chr18:44154462-44153667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
195-994
               

               
Cow position:
               
chr18:53525684-53526482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
195-999
               

               
Cow position:
               
chr18:43120331-43119527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
810
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
195-999
               

               
Cow position:
               
chr18:54979804-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
195-1038
               

               
Cow position:
               
chr18:42744725-42743882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 137
               

               
Conread position:
               
195-1038
               

               
Cow position:
               
chr18:44239749-44240592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 195
               

               
Conread position:
               
195-1038
               

               
Cow position:
               
chr18:51368190-51367348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
538, 382
               

               
Conread position:
               
195-1038
               

               
Cow position:
               
chr18:56128113-56128956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
196-1015
               

               
Cow position:
               
chr18:53497965-53498784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
196-1031
               

               
Cow position:
               
chr18:52012449-52011615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
197-967
               

               
Cow position:
               
chr18:40074933-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
197-978
               

               
Cow position:
               
chr18:55067116-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-1038
               

               
Cow position:
               
chr18:50022409-50021562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 157
               

               
Conread position:
               
197-1038
               

               
Cow position:
               
chr18:51766085-51765247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
848
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
198-1000
               

               
Cow position:
               
chr18:51368608-51367806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
805
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 708
               

               
Conread position:
               
198-1050
               

               
Cow position:
               
chr18:33064943-33064092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
202-883
               

               
Cow position:
               
chr18:14454021-14453340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
202-999
               

               
Cow position:
               
chr18:42837937-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
801
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 132
               

               
Conread position:
               
203-999
               

               
Cow position:
               
chr18:53636128-53635332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-999
               

               
Cow position:
               
chr18:56128037-56128833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
730, 724
               

               
Conread position:
               
204-1038
               

               
Cow position:
               
chr18:51789640-51788806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
204-1050
               

               
Cow position:
               
chr18:56330186-56329341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 130
               

               
Conread position:
               
205-885
               

               
Cow position:
               
chr18:50271463-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 149
               

               
Conread position:
               
205-1050
               

               
Cow position:
               
chr18:42724838-42723994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
206-732
               

               
Cow position:
               
chr18:14453285-14452758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
206-831
               

               
Cow position:
               
chr18:50250922-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
207-1038
               

               
Cow position:
               
chr18:52446862-52447691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 35
               

               
Conread position:
               
207-1050
               

               
Cow position:
               
chr18:49033378-49032536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
833, 0
               

               
Conread position:
               
208-801
               

               
Cow position:
               
chr18:33093101-33092508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 202
               

               
Conread position:
               
208-1038
               

               
Cow position:
               
chr18:51400285-51401115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
653, 668
               

               
Conread position:
               
209-999
               

               
Cow position:
               
chr18:40306175-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
212-969
               

               
Cow position:
               
chr18:56391590-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
212-1038
               

               
Cow position:
               
chr18:41197500-41198326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
622, 628
               

               
Conread position:
               
212-1059
               

               
Cow position:
               
chr18:53610542-53609697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
214-879
               

               
Cow position:
               
chr18:55497695-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 361
               

               
Conread position:
               
215-723
               

               
Cow position:
               
chr18:53571823-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
215-921
               

               
Cow position:
               
chr18:51839549-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 129
               

               
Conread position:
               
215-1000
               

               
Cow position:
               
chr18:55523320-55524105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 265
               

               
Conread position:
               
217-631
               

               
Cow position:
               
chr18:56267530-56267116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
218-1038
               

               
Cow position:
               
chr18:43175593-43174773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 136
               

               
Conread position:
               
218-1039
               

               
Cow position:
               
chr18:49021081-49021899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
170, 210
               

               
Conread position:
               
225-993
               

               
Cow position:
               
chr18:54979414-54980182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
225-993
               

               
Cow position:
               
chr18:54992674-54993442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
227-1031
               

               
Cow position:
               
chr18:55008583-55009385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 96
               

               
Conread position:
               
227-1039
               

               
Cow position:
               
chr18:50083306-50084118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
231-971
               

               
Cow position:
               
chr18:1417862-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 366
               

               
Conread position:
               
264-1039
               

               
Cow position:
               
chr18:55017773-55018548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 497
               

               
Conread position:
               
268-940
               

               
Cow position:
               
chr18:51874044-51874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
269-568
               

               
Cow position:
               
chr18:55442332-55442631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
207, 212
               

               
Conread position:
               
269-1039
               

               
Cow position:
               
chr18:44184904-44184134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
275-788
               

               
Cow position:
               
chr18:43048740-43048229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
275-918
               

               
Cow position:
               
chr18:33093118-33092475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
275-1038
               

               
Cow position:
               
chr18:44239745-44240508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 208
               

               
Conread position:
               
276-798
               

               
Cow position:
               
chr18:42827394-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
278-1039
               

               
Cow position:
               
chr18:44154463-44153706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
279-993
               

               
Cow position:
               
chr18:55067118-55066404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 485
               

               
Conread position:
               
281-1039
               

               
Cow position:
               
chr18:52012448-52011691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 66
               

               
Conread position:
               
285-723
               

               
Cow position:
               
chr18:14453290-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 126
               

               
Conread position:
               
287-1015
               

               
Cow position:
               
chr18:51400280-51401008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 50
               

               
Conread position:
               
289-1038
               

               
Cow position:
               
chr18:51813050-51812301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
485, 480
               

               
Conread position:
               
295-957
               

               
Cow position:
               
chr18:55497698-55497036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 217
               

               
Conread position:
               
295-999
               

               
Cow position:
               
chr18:51789885-51789181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 468
               

               
Conread position:
               
296-922
               

               
Cow position:
               
chr18:22844360-22843731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
158, 163
               

               
Conread position:
               
299-804
               

               
Cow position:
               
chr18:53571823-53572315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
249, 176
               

               
Conread position:
               
299-1014
               

               
Cow position:
               
chr18:53559686-53560401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
460, 466
               

               
Conread position:
               
301-619
               

               
Cow position:
               
chr18:56391972-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 100
               

               
Conread position:
               
304-1011
               

               
Cow position:
               
chr18:44253874-44253180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
381, 363
               

               
Conread position:
               
304-1017
               

               
Cow position:
               
chr18:56493774-56494490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
305-916
               

               
Cow position:
               
chr18:50271479-50272090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
305-967
               

               
Cow position:
               
chr18:14454002-14453340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
305-1011
               

               
Cow position:
               
chr18:51839543-51838837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
637, 631
               

               
Conread position:
               
305-1038
               

               
Cow position:
               
chr18:42960281-42959557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
305-1039
               

               
Cow position:
               
chr18:51368585-51367850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
306-1047
               

               
Cow position:
               
chr18:42675551-42674814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
309-999
               

               
Cow position:
               
chr18:51752313-51751623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 207
               

               
Conread position:
               
309-1013
               

               
Cow position:
               
chr18:53636106-53635402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
554, 561
               

               
Conread position:
               
309-1038
               

               
Cow position:
               
chr18:42790902-42791631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
309-1058
               

               
Cow position:
               
chr18:56128059-56128807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
310-915
               

               
Cow position:
               
chr18:50031043-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
310-993
               

               
Cow position:
               
chr18:53509261-53509944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 280
               

               
Conread position:
               
310-993
               

               
Cow position:
               
chr18:56433408-56434088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
113, 42
               

               
Conread position:
               
310-1008
               

               
Cow position:
               
chr18:53525715-53526413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 280
               

               
Conread position:
               
310-1039
               

               
Cow position:
               
chr18:50083305-50084034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 281
               

               
Conread position:
               
310-1039
               

               
Cow position:
               
chr18:56493696-56494428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
311-555
               

               
Cow position:
               
chr18:43053435-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
311-704
               

               
Cow position:
               
chr18:56267520-56267127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
314-994
               

               
Cow position:
               
chr18:54992679-54993359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
314-1039
               

               
Cow position:
               
chr18:42837909-42837184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
314-1039
               

               
Cow position:
               
chr18:53587140-53586415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
314-1058
               

               
Cow position:
               
chr18:54979419-54980162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
315-966
               

               
Cow position:
               
chr18:50295216-50295867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
320-1038
               

               
Cow position:
               
chr18:51400230-51400947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
332-999
               

               
Cow position:
               
chr18:54966912-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 418
               

               
Conread position:
               
335-1000
               

               
Cow position:
               
chr18:50281639-50282303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
342-1058
               

               
Cow position:
               
chr18:49021622-49022326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
343-1039
               

               
Cow position:
               
chr18:40074995-40075691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
344-999
               

               
Cow position:
               
chr18:50271434-50272089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 166
               

               
Conread position:
               
345-1000
               

               
Cow position:
               
chr18:50245715-50246370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
346-1038
               

               
Cow position:
               
chr18:44398464-44397772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
348-748
               

               
Cow position:
               
chr18:53598329-53597937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
150, 36
               

               
Conread position:
               
348-993
               

               
Cow position:
               
chr18:22634536-22635178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
350-915
               

               
Cow position:
               
chr18:33093127-33092562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 305
               

               
Conread position:
               
350-936
               

               
Cow position:
               
chr18:42827383-42827974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
351-1039
               

               
Cow position:
               
chr18:53498033-53498724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 416
               

               
Conread position:
               
351-1039
               

               
Cow position:
               
chr18:55008457-55009143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 95
               

               
Conread position:
               
353-729
               

               
Cow position:
               
chr18:51970405-51970774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
250, 144
               

               
Conread position:
               
353-798
               

               
Cow position:
               
chr18:40085954-40085495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
160, 149
               

               
Conread position:
               
353-831
               

               
Cow position:
               
chr18:44253334-44252864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
156, 167
               

               
Conread position:
               
353-999
               

               
Cow position:
               
chr18:51874045-51874684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 114
               

               
Conread position:
               
353-1000
               

               
Cow position:
               
chr18:50022508-50021855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
353-1038
               

               
Cow position:
               
chr18:41949366-41948681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 58
               

               
Conread position:
               
353-1039
               

               
Cow position:
               
chr18:40074921-40075607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
353-1039
               

               
Cow position:
               
chr18:43120257-43119571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 316
               

               
Conread position:
               
353-1039
               

               
Cow position:
               
chr18:55017778-55018464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 156
               

               
Conread position:
               
354-1038
               

               
Cow position:
               
chr18:44239740-44240424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
570, 577
               

               
Conread position:
               
354-1039
               

               
Cow position:
               
chr18:14454037-14453352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
355-1038
               

               
Cow position:
               
chr18:44154470-44153791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 481
               

               
Conread position:
               
355-1039
               

               
Cow position:
               
chr18:42960315-42959640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
356-1039
               

               
Cow position:
               
chr18:53509224-53509906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 10
               

               
Conread position:
               
356-1046
               

               
Cow position:
               
chr18:49033397-49032707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 503
               

               
Conread position:
               
358-861
               

               
Cow position:
               
chr18:43048741-43048240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 212
               

               
Conread position:
               
358-1039
               

               
Cow position:
               
chr18:56316036-56316717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
362-798
               

               
Cow position:
               
chr18:56267553-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
143, 136
               

               
Conread position:
               
362-1000
               

               
Cow position:
               
chr18:43094003-43093377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
472, 273
               

               
Conread position:
               
365-993
               

               
Cow position:
               
chr18:55523302-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
365-1000
               

               
Cow position:
               
chr18:55067116-55066481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 400
               

               
Conread position:
               
368-917
               

               
Cow position:
               
chr18:44253894-44253346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 377
               

               
Conread position:
               
369-804
               

               
Cow position:
               
chr18:14453290-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 140
               

               
Conread position:
               
369-1050
               

               
Cow position:
               
chr18:33065024-33064344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
372-1033
               

               
Cow position:
               
chr18:40306170-40306831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 471
               

               
Conread position:
               
373-1050
               

               
Cow position:
               
chr18:53636126-53635450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 65
               

               
Conread position:
               
377-864
               

               
Cow position:
               
chr18:50295362-50295849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 388
               

               
Conread position:
               
381-990
               

               
Cow position:
               
chr18:49021496-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
382-1039
               

               
Cow position:
               
chr18:55497695-55497038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 488
               

               
Conread position:
               
383-1038
               

               
Cow position:
               
chr18:53559686-53560341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
386-1039
               

               
Cow position:
               
chr18:40074873-40075523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 45
               

               
Conread position:
               
395-1039
               

               
Cow position:
               
chr18:43175818-43175192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
447, 48
               

               
Conread position:
               
396-1038
               

               
Cow position:
               
chr18:44254030-44253392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 87
               

               
Conread position:
               
404-1000
               

               
Cow position:
               
chr18:50271410-50272006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 113
               

               
Conread position:
               
422-1038
               

               
Cow position:
               
chr18:44184919-44184303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
591, 604
               

               
Conread position:
               
427-1039
               

               
Cow position:
               
chr18:54992708-54993320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
497, 492
               

               
Conread position:
               
427-1047
               

               
Cow position:
               
chr18:1417974-1418593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 195
               

               
Conread position:
               
428-1050
               

               
Cow position:
               
chr18:51400169-51400790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
430-1038
               

               
Cow position:
               
chr18:44398464-44397856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
436-1011
               

               
Cow position:
               
chr18:51874044-51874612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 115
               

               
Conread position:
               
436-1038
               

               
Cow position:
               
chr18:51969406-51969997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
437-640
               

               
Cow position:
               
chr18:43053393-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-1038
               

               
Cow position:
               
chr18:50295254-50295855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
437-1093
               

               
Cow position:
               
chr18:56391533-56390877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 397
               

               
Conread position:
               
438-1038
               

               
Cow position:
               
chr18:51789907-51789310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
438-1039
               

               
Cow position:
               
chr18:43167609-43168208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
440-973
               

               
Cow position:
               
chr18:14454035-14453502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
440-1038
               

               
Cow position:
               
chr18:43120338-43119740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
440-1039
               

               
Cow position:
               
chr18:53525678-53526276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
442-831
               

               
Cow position:
               
chr18:43048741-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 327
               

               
Conread position:
               
443-1000
               

               
Cow position:
               
chr18:33093118-33092561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
444-966
               

               
Cow position:
               
chr18:42827394-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 9
               

               
Conread position:
               
446-1038
               

               
Cow position:
               
chr18:43094003-43093423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
446-1039
               

               
Cow position:
               
chr18:33065115-33064522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
447-1039
               

               
Cow position:
               
chr18:54966859-54967451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
448-1038
               

               
Cow position:
               
chr18:51752341-51751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
449-996
               

               
Cow position:
               
chr18:55523302-55523849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
449-1038
               

               
Cow position:
               
chr18:51969018-51969588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
449-1058
               

               
Cow position:
               
chr18:55067116-55066508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
450-1039
               

               
Cow position:
               
chr18:42744722-42744133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
453-832
               

               
Cow position:
               
chr18:14453290-14452911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 319
               

               
Conread position:
               
454-1038
               

               
Cow position:
               
chr18:43094160-43093591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
304, 55
               

               
Conread position:
               
455-705
               

               
Cow position:
               
chr18:40251562-40251808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
164, 75
               

               
Conread position:
               
456-724
               

               
Cow position:
               
chr18:43053456-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
461-1039
               

               
Cow position:
               
chr18:40306175-40306753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
458, 473
               

               
Conread position:
               
461-1039
               

               
Cow position:
               
chr18:50031060-50030480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
467-862
               

               
Cow position:
               
chr18:53571823-53572207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
478-750
               

               
Cow position:
               
chr18:55075111-55075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
481-1050
               

               
Cow position:
               
chr18:56315823-56316391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 89
               

               
Conread position:
               
482-1011
               

               
Cow position:
               
chr18:1417945-1418474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 224
               

               
Conread position:
               
484-1039
               

               
Cow position:
               
chr18:51789945-51789393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
494-1050
               

               
Cow position:
               
chr18:41949395-41948838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 356
               

               
Conread position:
               
512-833
               

               
Cow position:
               
chr18:55442323-55442644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
512-1039
               

               
Cow position:
               
chr18:42837963-42837436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 430
               

               
Conread position:
               
520-993
               

               
Cow position:
               
chr18:50295253-50295726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
529-1013
               

               
Cow position:
               
chr18:53610561-53610077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
530-1000
               

               
Cow position:
               
chr18:1417825-1418295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 132
               

               
Conread position:
               
531-972
               

               
Cow position:
               
chr18:14453296-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 325
               

               
Conread position:
               
531-997
               

               
Cow position:
               
chr18:51969333-51969797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 281
               

               
Conread position:
               
531-999
               

               
Cow position:
               
chr18:55523300-55523768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 285
               

               
Conread position:
               
531-1013
               

               
Cow position:
               
chr18:53497964-53498449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 51
               

               
Conread position:
               
532-917
               

               
Cow position:
               
chr18:43048735-43048350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 225
               

               
Conread position:
               
532-993
               

               
Cow position:
               
chr18:55008386-55008845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
298, 166
               

               
Conread position:
               
532-1039
               

               
Cow position:
               
chr18:42790957-42791464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 312
               

               
Conread position:
               
532-1039
               

               
Cow position:
               
chr18:51368777-51368270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
535-799
               

               
Cow position:
               
chr18:51873695-51873960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 235
               

               
Conread position:
               
537-1038
               

               
Cow position:
               
chr18:14454022-14453521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
537-1038
               

               
Cow position:
               
chr18:42827402-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
539-1008
               

               
Cow position:
               
chr18:42724840-42724371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
156, 167
               

               
Conread position:
               
539-1011
               

               
Cow position:
               
chr18:51838786-51838319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
377, 195
               

               
Conread position:
               
540-1039
               

               
Cow position:
               
chr18:40306170-40306669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
543-1038
               

               
Cow position:
               
chr18:43120403-43119908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
543-1039
               

               
Cow position:
               
chr18:44254051-44253559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
231, 160
               

               
Conread position:
               
543-1058
               

               
Cow position:
               
chr18:50281678-50282192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
544-1039
               

               
Cow position:
               
chr18:50031061-50030564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
544-1056
               

               
Cow position:
               
chr18:33093101-33092590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
545-1002
               

               
Cow position:
               
chr18:50083288-50083745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
553-996
               

               
Cow position:
               
chr18:54979406-54979849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
281, 290
               

               
Conread position:
               
553-1038
               

               
Cow position:
               
chr18:54992666-54993151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
200, 191
               

               
Conread position:
               
557-1039
               

               
Cow position:
               
chr18:43175590-43175108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-1050
               

               
Cow position:
               
chr18:56128055-56128547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
557-1056
               

               
Cow position:
               
chr18:42694196-42693700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
560-804
               

               
Cow position:
               
chr18:43053438-43053194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
572-1038
               

               
Cow position:
               
chr18:44398490-44398024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 303
               

               
Conread position:
               
578-1000
               

               
Cow position:
               
chr18:33065151-33064729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
580-1038
               

               
Cow position:
               
chr18:44184929-44184471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 249
               

               
Conread position:
               
585-1000
               

               
Cow position:
               
chr18:42790842-42791257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
586-1000
               

               
Cow position:
               
chr18:50059746-50059330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
596-1005
               

               
Cow position:
               
chr18:43167513-43167922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
596-1050
               

               
Cow position:
               
chr18:52012468-52012017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
602-999
               

               
Cow position:
               
chr18:42960482-42960091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
603-1000
               

               
Cow position:
               
chr18:50049247-50048846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 164
               

               
Conread position:
               
603-1005
               

               
Cow position:
               
chr18:42827384-42827786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
231, 245
               

               
Conread position:
               
603-1038
               

               
Cow position:
               
chr18:1417814-1418249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
604-1036
               

               
Cow position:
               
chr18:43023090-43022658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
605-999
               

               
Cow position:
               
chr18:40086954-40086564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
605-1058
               

               
Cow position:
               
chr18:54992634-54993086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
162, 135
               

               
Conread position:
               
606-1034
               

               
Cow position:
               
chr18:14454037-14453609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 338
               

               
Conread position:
               
606-1057
               

               
Cow position:
               
chr18:52427532-52427981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
249, 238
               

               
Conread position:
               
607-1039
               

               
Cow position:
               
chr18:33093122-33092690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
611-918
               

               
Cow position:
               
chr18:51873689-51873995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
611-999
               

               
Cow position:
               
chr18:43048740-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 224
               

               
Conread position:
               
613-1038
               

               
Cow position:
               
chr18:42744727-42744302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 231
               

               
Conread position:
               
614-966
               

               
Cow position:
               
chr18:56267469-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
614-1011
               

               
Cow position:
               
chr18:56248245-56247856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
133, 21
               

               
Conread position:
               
615-1039
               

               
Cow position:
               
chr18:54966775-54967199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
615-1039
               

               
Cow position:
               
chr18:54979300-54979724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
616-1038
               

               
Cow position:
               
chr18:14453295-14452873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 324
               

               
Conread position:
               
616-1058
               

               
Cow position:
               
chr18:55523301-55523742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
250, 254
               

               
Conread position:
               
623-999
               

               
Cow position:
               
chr18:50031066-50030691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
623-1039
               

               
Cow position:
               
chr18:42724840-42724424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
320, 313
               

               
Conread position:
               
635-999
               

               
Cow position:
               
chr18:51839549-51839185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
636-1007
               

               
Cow position:
               
chr18:50295201-50295572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 169
               

               
Conread position:
               
638-1008
               

               
Cow position:
               
chr18:50031135-50030767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
286, 195
               

               
Conread position:
               
638-1008
               

               
Cow position:
               
chr18:56128052-56128422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
641-993
               

               
Cow position:
               
chr18:53571829-53572170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
662-1039
               

               
Cow position:
               
chr18:42837980-42837604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
680-1039
               

               
Cow position:
               
chr18:42985587-42985228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
151, 161
               

               
Conread position:
               
684-1038
               

               
Cow position:
               
chr18:50049250-50048892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 169
               

               
Conread position:
               
688-1038
               

               
Cow position:
               
chr18:43023090-43022740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 171
               

               
Conread position:
               
689-1006
               

               
Cow position:
               
chr18:55442332-55442649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
693-1046
               

               
Cow position:
               
chr18:56267474-56267121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
694-1038
               

               
Cow position:
               
chr18:43048741-43048397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
319, 324
               

               
Conread position:
               
708-1039
               

               
Cow position:
               
chr18:56128037-56128369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
725-1039
               

               
Cow position:
               
chr18:56391968-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
746-1055
               

               
Cow position:
               
chr18:52012486-52012179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
772-1039
               

               
Cow position:
               
chr18:56267479-56267212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.