Cow genome map

Conread name: Ss1.1-Thy1-THY010070G10.5

Conread position: 33-711
Cow position: chr3:62722247-62721568 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 154

Conread position: 57-972
Cow position: chr3:62742381-62743270 (view UCSC Genome Browser custom track)
Alignm length: 924
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 129

Conread position: 63-921
Cow position: chr3:62742637-62743471 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 19

Conread position: 64-967
Cow position: chr3:62742556-62743433 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 85

Conread position: 103-631
Cow position: chr3:62722092-62721564 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 103-713
Cow position: chr3:77351175-77350576 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 372
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 62

Conread position: 103-731
Cow position: chr3:68027157-68027784 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 83

Conread position: 106-789
Cow position: chr3:62722257-62721574 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 403

Conread position: 118-627
Cow position: chr3:68045849-68046356 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 317
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 310, 298

Conread position: 137-496
Cow position: chr3:20194905-20195264 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 285, 278

Conread position: 137-719
Cow position: chr3:68045784-68046364 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 142-825
Cow position: chr3:77351304-77350632 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 422
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 28, 34

Conread position: 146-695
Cow position: chr3:20194746-20195295 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-780
Cow position: chr3:77351215-77350593 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 384
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 58, 36

Conread position: 146-852
Cow position: chr3:68027032-68027738 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 18

Conread position: 146-878
Cow position: chr3:62722301-62721567 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 431

Conread position: 146-892
Cow position: chr3:68045625-68046369 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 108

Conread position: 150-579
Cow position: chr3:20194833-20195263 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 150-922
Cow position: chr3:62722381-62721609 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 59

Conread position: 151-969
Cow position: chr3:62742226-62743032 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 12

Conread position: 211-787
Cow position: chr3:20194727-20195303 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 227-735
Cow position: chr3:62743034-62743534 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 315
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 273, 75

Conread position: 275-919
Cow position: chr3:68027077-68027721 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 141

Conread position: 275-919
Cow position: chr3:68045670-68046314 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 290-542
Cow position: chr3:20194446-20194698 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 143

Conread position: 296-872
Cow position: chr3:20194728-20195304 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 125

Conread position: 305-1011
Cow position: chr3:68045616-68046322 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 49

Conread position: 309-916
Cow position: chr3:77351305-77350707 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 366
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 124

Conread position: 309-1039
Cow position: chr3:62722306-62721576 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 717, 703

Conread position: 314-1011
Cow position: chr3:68027032-68027729 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 195

Conread position: 345-1032
Cow position: chr3:62742250-62742932 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 72

Conread position: 350-832
Cow position: chr3:77351180-77350706 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 298
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 203, 81

Conread position: 374-597
Cow position: chr3:20194446-20194669 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 126, 138

Conread position: 376-1057
Cow position: chr3:62722323-62721643 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 664, 0

Conread position: 379-954
Cow position: chr3:20194727-20195302 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 348
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 35

Conread position: 427-1039
Cow position: chr3:68045654-68046266 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 249

Conread position: 431-1008
Cow position: chr3:68045574-68046151 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 117

Conread position: 437-664
Cow position: chr3:16020400-16020177 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 69

Conread position: 437-1038
Cow position: chr3:68027071-68027672 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 420

Conread position: 463-1041
Cow position: chr3:20194727-20195305 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 519-747
Cow position: chr3:16020402-16020178 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 189, 0

Conread position: 549-1038
Cow position: chr3:68045608-68046097 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 550-1038
Cow position: chr3:68027016-68027504 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 564-1039
Cow position: chr3:62722387-62721912 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 49

Conread position: 684-1038
Cow position: chr3:68045575-68045929 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 174, 169

Conread position: 789-1011
Cow position: chr3:20194441-20194663 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.