Cow genome map
| Conread name: | Ss1.1-Thy1-THY010070G10.5 |
| Conread position: | 1-598 |
| Cow position: | |
| Alignm length: | 600 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 1-676 |
| Cow position: | |
| Alignm length: | 685 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 2-882 |
| Cow position: | |
| Alignm length: | 892 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 2-956 |
| Cow position: | |
| Alignm length: | 960 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 2-1039 |
| Cow position: | |
| Alignm length: | 1041 |
| Alignm identity: | 634 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 7-676 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 38-1038 |
| Cow position: | |
| Alignm length: | 1006 |
| Alignm identity: | 654 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 56-496 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-1038 |
| Cow position: | |
| Alignm length: | 987 |
| Alignm identity: | 619 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 77 |
| Conread position: | 66-631 |
| Cow position: | |
| Alignm length: | 570 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 202 |
| Conread position: | 102-921 |
| Cow position: | |
| Alignm length: | 825 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 152 |
| Conread position: | 103-921 |
| Cow position: | |
| Alignm length: | 831 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 137 |
| Conread position: | 103-1011 |
| Cow position: | |
| Alignm length: | 913 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 103-1038 |
| Cow position: | |
| Alignm length: | 943 |
| Alignm identity: | 601 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 151 |
| Conread position: | 103-1050 |
| Cow position: | |
| Alignm length: | 952 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 728, 737 |
| Conread position: | 105-698 |
| Cow position: | |
| Alignm length: | 596 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 493, 478 |
| Conread position: | 105-843 |
| Cow position: | |
| Alignm length: | 740 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 556, 550 |
| Conread position: | 105-1005 |
| Cow position: | |
| Alignm length: | 912 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 109-1038 |
| Cow position: | |
| Alignm length: | 933 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 474, 489 |
| Conread position: | 123-999 |
| Cow position: | |
| Alignm length: | 893 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 132-1038 |
| Cow position: | |
| Alignm length: | 913 |
| Alignm identity: | 602 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 124 |
| Conread position: | 137-416 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 194, 200 |
| Conread position: | 137-750 |
| Cow position: | |
| Alignm length: | 624 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 142-1039 |
| Cow position: | |
| Alignm length: | 900 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 885 |
| Conread position: | 144-450 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 201, 189 |
| Conread position: | 144-620 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 144-858 |
| Cow position: | |
| Alignm length: | 716 |
| Alignm identity: | 414 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 634, 640 |
| Conread position: | 144-1000 |
| Cow position: | |
| Alignm length: | 873 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 146-696 |
| Cow position: | |
| Alignm length: | 551 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-749 |
| Cow position: | |
| Alignm length: | 615 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 146-765 |
| Cow position: | |
| Alignm length: | 622 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 186 |
| Conread position: | 146-831 |
| Cow position: | |
| Alignm length: | 694 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 146-832 |
| Cow position: | |
| Alignm length: | 693 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 146-966 |
| Cow position: | |
| Alignm length: | 834 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 104 |
| Conread position: | 146-999 |
| Cow position: | |
| Alignm length: | 863 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 110 |
| Conread position: | 146-1000 |
| Cow position: | |
| Alignm length: | 872 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 146-1000 |
| Cow position: | |
| Alignm length: | 871 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 146-1039 |
| Cow position: | |
| Alignm length: | 898 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 185-595 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 103 |
| Conread position: | 195-1038 |
| Cow position: | |
| Alignm length: | 846 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 403 |
| Conread position: | 197-1000 |
| Cow position: | |
| Alignm length: | 814 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 207 |
| Conread position: | 198-753 |
| Cow position: | |
| Alignm length: | 563 |
| Alignm identity: | 346 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 198-840 |
| Cow position: | |
| Alignm length: | 643 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 199-918 |
| Cow position: | |
| Alignm length: | 731 |
| Alignm identity: | 436 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 205-961 |
| Cow position: | |
| Alignm length: | 761 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 127 |
| Conread position: | 205-1039 |
| Cow position: | |
| Alignm length: | 838 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 211 |
| Conread position: | 207-975 |
| Cow position: | |
| Alignm length: | 770 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 211-943 |
| Cow position: | |
| Alignm length: | 735 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 651, 658 |
| Conread position: | 212-999 |
| Cow position: | |
| Alignm length: | 800 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 215-1000 |
| Cow position: | |
| Alignm length: | 790 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 205 |
| Conread position: | 216-870 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 383 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 58, 63 |
| Conread position: | 259-1038 |
| Cow position: | |
| Alignm length: | 785 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 322 |
| Conread position: | 274-933 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 136 |
| Conread position: | 278-996 |
| Cow position: | |
| Alignm length: | 729 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 66 |
| Conread position: | 300-944 |
| Cow position: | |
| Alignm length: | 647 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 115 |
| Conread position: | 309-1000 |
| Cow position: | |
| Alignm length: | 692 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-1039 |
| Cow position: | |
| Alignm length: | 720 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 510 |
| Conread position: | 326-767 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-993 |
| Cow position: | |
| Alignm length: | 653 |
| Alignm identity: | 389 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 61 |
| Conread position: | 350-1000 |
| Cow position: | |
| Alignm length: | 653 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 246 |
| Conread position: | 353-1000 |
| Cow position: | |
| Alignm length: | 656 |
| Alignm identity: | 392 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 353-1000 |
| Cow position: | |
| Alignm length: | 658 |
| Alignm identity: | 405 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 355-999 |
| Cow position: | |
| Alignm length: | 652 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 358-1015 |
| Cow position: | |
| Alignm length: | 660 |
| Alignm identity: | 378 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 359-1019 |
| Cow position: | |
| Alignm length: | 665 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 365-1026 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 385 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 325, 318 |
| Conread position: | 376-1000 |
| Cow position: | |
| Alignm length: | 636 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 130 |
| Conread position: | 379-1012 |
| Cow position: | |
| Alignm length: | 635 |
| Alignm identity: | 370 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 422-1000 |
| Cow position: | |
| Alignm length: | 579 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-1000 |
| Cow position: | |
| Alignm length: | 572 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 14, 142 |
| Conread position: | 450-1039 |
| Cow position: | |
| Alignm length: | 592 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 452-1039 |
| Cow position: | |
| Alignm length: | 588 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 0 |
| Conread position: | 454-917 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 311 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 463-1029 |
| Cow position: | |
| Alignm length: | 567 |
| Alignm identity: | 339 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 557, 0 |
| Conread position: | 468-1041 |
| Cow position: | |
| Alignm length: | 575 |
| Alignm identity: | 347 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 382, 377 |
| Conread position: | 469-682 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 108 |
| Conread position: | 511-1039 |
| Cow position: | |
| Alignm length: | 530 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 159 |
| Conread position: | 531-999 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 114, 28 |
| Conread position: | 543-1039 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 221 |
| Conread position: | 548-1000 |
| Cow position: | |
| Alignm length: | 459 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 596-1027 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 254, 10 |
| Conread position: | 596-1039 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 163, 169 |
| Conread position: | 604-915 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 230, 140 |
| Conread position: | 605-1009 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 124, 141 |
| Conread position: | 629-1000 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 731-1039 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.