Cow genome map
| Conread name: | Ss1.1-Thy1-THY010070G10.5 |
| Conread position: | 2-653 |
| Cow position: | chr8:55581122-55581773 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 398 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 2-712 |
| Cow position: | chr8:46816681-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 2-777 |
| Cow position: | chr8:48406994-48406210 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 2-917 |
| Cow position: | chr8:46816429-46817344 (view UCSC Genome Browser custom track) |
| Alignm length: | 921 |
| Alignm identity: | 591 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 3-798 |
| Cow position: | chr8:48407077-48406282 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 6-1011 |
| Cow position: | chr8:48407578-48406573 (view UCSC Genome Browser custom track) |
| Alignm length: | 1010 |
| Alignm identity: | 626 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 8-657 |
| Cow position: | chr8:55581044-55581693 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 15-1038 |
| Cow position: | chr8:46816109-46817129 (view UCSC Genome Browser custom track) |
| Alignm length: | 1030 |
| Alignm identity: | 653 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 28-779 |
| Cow position: | chr8:45201346-45202088 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 10 |
| Conread position: | 28-1038 |
| Cow position: | chr8:48407302-48406294 (view UCSC Genome Browser custom track) |
| Alignm length: | 1018 |
| Alignm identity: | 638 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 10 |
| Conread position: | 48-999 |
| Cow position: | chr8:46816391-46817342 (view UCSC Genome Browser custom track) |
| Alignm length: | 957 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 390 |
| Conread position: | 55-921 |
| Cow position: | chr8:45201035-45201901 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 123 |
| Conread position: | 57-742 |
| Cow position: | chr8:45201289-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 57-793 |
| Cow position: | chr8:45201205-45201941 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 64-863 |
| Cow position: | chr8:45201128-45201927 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 347 |
| Conread position: | 69-966 |
| Cow position: | chr8:48407179-48406282 (view UCSC Genome Browser custom track) |
| Alignm length: | 899 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 418, 466 |
| Conread position: | 90-1038 |
| Cow position: | chr8:48407323-48406378 (view UCSC Genome Browser custom track) |
| Alignm length: | 953 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 11 |
| Conread position: | 103-735 |
| Cow position: | chr8:55581055-55581687 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 103-1031 |
| Cow position: | chr8:45200999-45201927 (view UCSC Genome Browser custom track) |
| Alignm length: | 931 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 104-1038 |
| Cow position: | chr8:46815940-46816877 (view UCSC Genome Browser custom track) |
| Alignm length: | 942 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 139 |
| Conread position: | 104-1038 |
| Cow position: | chr8:46816363-46817297 (view UCSC Genome Browser custom track) |
| Alignm length: | 942 |
| Alignm identity: | 603 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 105-779 |
| Cow position: | chr8:46816700-46817374 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 123-1038 |
| Cow position: | chr8:55580738-55581654 (view UCSC Genome Browser custom track) |
| Alignm length: | 923 |
| Alignm identity: | 603 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 125-972 |
| Cow position: | chr8:48407627-48406780 (view UCSC Genome Browser custom track) |
| Alignm length: | 849 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 711, 717 |
| Conread position: | 137-871 |
| Cow position: | chr8:55581005-55581739 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 367 |
| Conread position: | 137-999 |
| Cow position: | chr8:46816312-46817174 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 277 |
| Conread position: | 137-1000 |
| Cow position: | chr8:46816060-46816923 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 215 |
| Conread position: | 137-1039 |
| Cow position: | chr8:45200949-45201851 (view UCSC Genome Browser custom track) |
| Alignm length: | 906 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 119 |
| Conread position: | 146-1000 |
| Cow position: | chr8:55580846-55581700 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 363 |
| Conread position: | 203-1056 |
| Cow position: | chr8:48407633-48406781 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 311-736 |
| Cow position: | chr8:6958059-6957635 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 344-1050 |
| Cow position: | chr8:46815601-46816300 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 425 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 345, 171 |
| Conread position: | 376-1039 |
| Cow position: | chr8:45200936-45201599 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 78 |
| Conread position: | 395-798 |
| Cow position: | chr8:6958059-6957657 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 272, 0 |
| Conread position: | 456-1039 |
| Cow position: | chr8:55580737-55581319 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 468-826 |
| Cow position: | chr8:6958069-6957713 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 559-966 |
| Cow position: | chr8:6958063-6957657 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 354, 274 |
Show alignments to all cow chromosomes.