Cow genome map


           Conread name:
           Ss1.1-Thy1-THY010201G04.5
        

               Conread position:
               155-935
               

               Cow position:
               chrX:354461-355219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               794
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               190-445
               

               Cow position:
               chrX:27467162-27467415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               250-529
               

               Cow position:
               chrX:33704577-33704292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               256-508
               

               Cow position:
               chrX:15252629-15252895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               304-872
               

               Cow position:
               chrX:3001332-3000764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 78
               

               Conread position:
               375-745
               

               Cow position:
               chrX:44029892-44029522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               541-801
               

               Cow position:
               chrX:1784783-1784531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 84
               

               Conread position:
               715-926
               

               Cow position:
               chrX:31069689-31069478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               186, 161
               

               Conread position:
               913-1146
               

               Cow position:
               chrX:1784340-1784095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               921-1151
               

               Cow position:
               chrX:13013686-13013917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               170, 67
               
Show alignments to all cow chromosomes.