Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01D040102.5.5 |
| Conread position: | 37-134 |
| Cow position: | chr5:22340302-22340397 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 125-783 |
| Cow position: | chr5:17899875-17899217 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 636 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-354 |
| Cow position: | chr5:22167233-22167006 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-354 |
| Cow position: | chr5:22179216-22178989 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-354 |
| Cow position: | chr5:22299571-22299798 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-354 |
| Cow position: | chr5:22341745-22341972 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-354 |
| Cow position: | chr5:67437375-67437148 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 229-1480 |
| Cow position: | chr5:22300263-22301513 (view UCSC Genome Browser custom track) |
| Alignm length: | 1252 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 854, 0 |
| Conread position: | 350-500 |
| Cow position: | chr5:22166868-22166718 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-500 |
| Cow position: | chr5:22178851-22178701 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-500 |
| Cow position: | chr5:22299937-22300087 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-500 |
| Cow position: | chr5:22342111-22342261 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-500 |
| Cow position: | chr5:24450359-24450509 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-500 |
| Cow position: | chr5:67435682-67435532 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 495-1645 |
| Cow position: | chr5:22342618-22343758 (view UCSC Genome Browser custom track) |
| Alignm length: | 1155 |
| Alignm identity: | 1087 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1103, 1021 |
| Conread position: | 499-1460 |
| Cow position: | chr5:22164638-22163677 (view UCSC Genome Browser custom track) |
| Alignm length: | 962 |
| Alignm identity: | 913 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 499-1460 |
| Cow position: | chr5:24452592-24453553 (view UCSC Genome Browser custom track) |
| Alignm length: | 962 |
| Alignm identity: | 917 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 509-1182 |
| Cow position: | chr5:67434072-67433399 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1179-1484 |
| Cow position: | chr5:67429369-67429070 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 0 |
| Conread position: | 1224-1460 |
| Cow position: | chr5:17899223-17898987 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1281-1460 |
| Cow position: | chr5:22176401-22176222 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.