Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01E120018.5 |
| Conread position: | 1-180 |
| Cow position: | chr11:45853034-45853215 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 1-181 |
| Cow position: | chr11:65756760-65756940 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 1-213 |
| Cow position: | chr11:55216266-55216055 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 1-224 |
| Cow position: | chr11:8820141-8819916 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 2-203 |
| Cow position: | chr11:51224561-51224357 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 62 |
| Conread position: | 2-228 |
| Cow position: | chr11:12178910-12178683 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 3-222 |
| Cow position: | chr11:53429093-53429313 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 3-222 |
| Cow position: | chr11:60757046-60757265 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 3-227 |
| Cow position: | chr11:72313377-72313152 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 10-163 |
| Cow position: | chr11:24539741-24539589 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 10-213 |
| Cow position: | chr11:1285201-1285405 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 53 |
| Conread position: | 10-222 |
| Cow position: | chr11:41167773-41167985 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 11-205 |
| Cow position: | chr11:47158864-47159059 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 42, 52 |
Show alignments to all cow chromosomes.