Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01E120018.5
        

               Conread position:
               1-218
               

               Cow position:
               chr17:15481465-15481251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               1-221
               

               Cow position:
               chr17:597737-597956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 138
               

               Conread position:
               1-222
               

               Cow position:
               chr17:11775150-11775373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               8, 63
               

               Conread position:
               1-223
               

               Cow position:
               chr17:38759430-38759654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               2-163
               

               Cow position:
               chr17:4608378-4608216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               3-231
               

               Cow position:
               chr17:6262946-6262718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 61
               

               Conread position:
               4-203
               

               Cow position:
               chr17:41243209-41243015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               143, 56
               

               Conread position:
               10-153
               

               Cow position:
               chr17:37460457-37460313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 95
               

               Conread position:
               10-231
               

               Cow position:
               chr17:29950297-29950076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 53
               
Show alignments to all cow chromosomes.