Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01E120018.5 |
| Conread position: | 1-213 |
| Cow position: | chr3:57977401-57977616 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 1-217 |
| Cow position: | chr3:61954907-61954692 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 1-221 |
| Cow position: | chr3:67450996-67450781 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 1-221 |
| Cow position: | chr3:76648958-76649181 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 8, 215 |
| Conread position: | 1-222 |
| Cow position: | chr3:13276136-13276358 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 1-223 |
| Cow position: | chr3:8563917-8564139 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 1-223 |
| Cow position: | chr3:10038340-10038121 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 1-223 |
| Cow position: | chr3:10932013-10931792 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 1-223 |
| Cow position: | chr3:21222571-21222796 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 1-223 |
| Cow position: | chr3:41582540-41582315 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 1-223 |
| Cow position: | chr3:44504400-44504623 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 2-205 |
| Cow position: | chr3:24904825-24904623 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 2-213 |
| Cow position: | chr3:37349008-37349221 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-222 |
| Cow position: | chr3:51068755-51068978 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 214 |
| Conread position: | 3-222 |
| Cow position: | chr3:69930690-69930910 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 3-222 |
| Cow position: | chr3:72633217-72632996 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 3-222 |
| Cow position: | chr3:75038698-75038918 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 10-221 |
| Cow position: | chr3:61554544-61554756 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 86, 201 |
| Conread position: | 55-223 |
| Cow position: | chr3:64412969-64413142 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.