Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01E120018.5 |
| Conread position: | 1-214 |
| Cow position: | chr5:48017260-48017052 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 1-222 |
| Cow position: | chr5:28331573-28331791 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 1-222 |
| Cow position: | chr5:28571599-28571377 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 1-223 |
| Cow position: | chr5:8201394-8201179 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 1-223 |
| Cow position: | chr5:26348440-26348661 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 1-223 |
| Cow position: | chr5:51069257-51069038 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 1-231 |
| Cow position: | chr5:1338870-1339102 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 3-222 |
| Cow position: | chr5:46735227-46735447 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 3-223 |
| Cow position: | chr5:7396297-7396077 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 5-221 |
| Cow position: | chr5:41425733-41425951 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 154 |
| Conread position: | 39-213 |
| Cow position: | chr5:32954341-32954515 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 22 |
Show alignments to all cow chromosomes.