Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01E120018.5 |
| Conread position: | 1-202 |
| Cow position: | chrX:37753451-37753246 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 1-205 |
| Cow position: | chrX:2655738-2655532 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 27, 117 |
| Conread position: | 1-212 |
| Cow position: | chrX:23269160-23269375 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 1-222 |
| Cow position: | chrX:10823068-10823285 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 57 |
| Conread position: | 1-223 |
| Cow position: | chrX:13654521-13654296 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 1-223 |
| Cow position: | chrX:16858644-16858869 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 1-224 |
| Cow position: | chrX:11904972-11905196 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 2-223 |
| Cow position: | chrX:21781360-21781138 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 2-224 |
| Cow position: | chrX:15377637-15377857 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 3-222 |
| Cow position: | chrX:2479603-2479823 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 3-222 |
| Cow position: | chrX:26755614-26755834 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 3-222 |
| Cow position: | chrX:29288022-29287801 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 3-222 |
| Cow position: | chrX:30286431-30286212 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 3-223 |
| Cow position: | chrX:29029675-29029886 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 4-183 |
| Cow position: | chrX:4905963-4906144 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 6-220 |
| Cow position: | chrX:39765579-39765369 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 6-223 |
| Cow position: | chrX:33173133-33173351 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 10-220 |
| Cow position: | chrX:5070554-5070764 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 10-222 |
| Cow position: | chrX:303134-302924 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 81, 139 |
| Conread position: | 12-222 |
| Cow position: | chrX:388148-387939 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 195 |
| Conread position: | 19-223 |
| Cow position: | chrX:16230865-16231070 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 49 |
Show alignments to all cow chromosomes.