Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01F040013.5
        

               Conread position:
               842-995
               

               Cow position:
               chr11:9600271-9600119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               842-1036
               

               Cow position:
               chr11:17090841-17091032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               156, 26
               

               Conread position:
               842-1075
               

               Cow position:
               chr11:29542673-29542902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               157, 39
               

               Conread position:
               844-1025
               

               Cow position:
               chr11:38807891-38808070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               844-1027
               

               Cow position:
               chr11:57584885-57585067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               154, 100
               

               Conread position:
               851-1015
               

               Cow position:
               chr11:49791577-49791739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               147, 28
               

               Conread position:
               851-1022
               

               Cow position:
               chr11:59129658-59129487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               853-1026
               

               Cow position:
               chr11:18883016-18883186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               880-1028
               

               Cow position:
               chr11:39662348-39662495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 62
               
Show alignments to all cow chromosomes.