Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01F040013.5
        

               Conread position:
               837-1012
               

               Cow position:
               chr5:51158256-51158429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               838-1022
               

               Cow position:
               chr5:38874515-38874332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               160, 106
               

               Conread position:
               838-1033
               

               Cow position:
               chr5:37401723-37401921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               131, 105
               

               Conread position:
               839-1027
               

               Cow position:
               chr5:31059842-31060029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               159, 104
               

               Conread position:
               844-1030
               

               Cow position:
               chr5:30357322-30357511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               844-1036
               

               Cow position:
               chr5:18477783-18477592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               154, 89
               

               Conread position:
               862-1030
               

               Cow position:
               chr5:48986069-48985904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 7
               
Show alignments to all cow chromosomes.