Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F120100.5 |
| Conread position: | 101-374 |
| Cow position: | chr10:11959563-11959294 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 310-860 |
| Cow position: | chr10:49308131-49308677 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 348-523 |
| Cow position: | chr10:24301140-24300963 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 362-774 |
| Cow position: | chr10:20385365-20384959 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 362-839 |
| Cow position: | chr10:10414423-10414890 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 369-944 |
| Cow position: | chr10:41353307-41352737 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 139 |
| Conread position: | 382-819 |
| Cow position: | chr10:40747334-40747761 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 382-821 |
| Cow position: | chr10:44517104-44516666 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 177 |
| Conread position: | 383-664 |
| Cow position: | chr10:38524813-38525092 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 145 |
| Conread position: | 384-704 |
| Cow position: | chr10:55284708-55285016 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 245, 63 |
| Conread position: | 384-860 |
| Cow position: | chr10:29068172-29068632 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 385-557 |
| Cow position: | chr10:2076882-2076707 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 385-752 |
| Cow position: | chr10:41512318-41511959 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 385-774 |
| Cow position: | chr10:34319347-34318959 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 175 |
| Conread position: | 385-782 |
| Cow position: | chr10:15864308-15863921 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 385-794 |
| Cow position: | chr10:21902676-21902276 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 390-790 |
| Cow position: | chr10:3546452-3546070 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 458-812 |
| Cow position: | chr10:28892916-28892562 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 280, 103 |
| Conread position: | 464-1174 |
| Cow position: | chr10:42108127-42108843 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 471-860 |
| Cow position: | chr10:8329221-8328843 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 122, 14 |
| Conread position: | 487-894 |
| Cow position: | chr10:39583323-39582915 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 72 |
| Conread position: | 647-848 |
| Cow position: | chr10:67600559-67600766 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 719-1084 |
| Cow position: | chr10:42746753-42747122 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 869-1166 |
| Cow position: | chr10:38525434-38525735 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 108 |
Show alignments to all cow chromosomes.