Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01F120100.5
        

               Conread position:
               171-371
               

               Cow position:
               chr13:24581815-24581613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               175-364
               

               Cow position:
               chr13:1559334-1559523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 117
               

               Conread position:
               385-782
               

               Cow position:
               chr13:34110544-34110928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               385-805
               

               Cow position:
               chr13:60649523-60649930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               386-557
               

               Cow position:
               chr13:33281014-33280842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               387-558
               

               Cow position:
               chr13:19744155-19744324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               387-573
               

               Cow position:
               chr13:56315752-56315572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 120
               

               Conread position:
               459-715
               

               Cow position:
               chr13:47858565-47858815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               111, 83
               

               Conread position:
               641-848
               

               Cow position:
               chr13:49194100-49193891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               650-917
               

               Cow position:
               chr13:15081954-15081685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 112
               
Show alignments to all cow chromosomes.