Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F120100.5 |
| Conread position: | 98-336 |
| Cow position: | chr15:8700045-8699810 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 98-367 |
| Cow position: | chr15:20837667-20837932 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 98-369 |
| Cow position: | chr15:5911071-5910795 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 98-376 |
| Cow position: | chr15:53336282-53336550 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 140, 10 |
| Conread position: | 98-387 |
| Cow position: | chr15:6781184-6780899 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 114-370 |
| Cow position: | chr15:13081830-13082090 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 120-371 |
| Cow position: | chr15:12899558-12899812 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 134-377 |
| Cow position: | chr15:14374256-14374010 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 162-357 |
| Cow position: | chr15:39439727-39439530 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 169-371 |
| Cow position: | chr15:34394771-34394574 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 115 |
| Conread position: | 170-370 |
| Cow position: | chr15:27595316-27595111 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 332-532 |
| Cow position: | chr15:4894867-4895065 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 367-990 |
| Cow position: | chr15:8406135-8406745 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 386 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 377-752 |
| Cow position: | chr15:5076841-5076461 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 310 |
| Conread position: | 381-731 |
| Cow position: | chr15:6613416-6613758 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 132 |
| Conread position: | 384-549 |
| Cow position: | chr15:36095035-36094873 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 385-559 |
| Cow position: | chr15:11300085-11299913 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 385-573 |
| Cow position: | chr15:12612617-12612805 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 151 |
| Conread position: | 385-745 |
| Cow position: | chr15:40061413-40061756 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 155, 22 |
| Conread position: | 385-877 |
| Cow position: | chr15:12362590-12363078 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 389-821 |
| Cow position: | chr15:42860841-42860417 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 131, 138 |
| Conread position: | 392-804 |
| Cow position: | chr15:4633027-4632628 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 145 |
| Conread position: | 394-794 |
| Cow position: | chr15:23263965-23264353 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 22, 69 |
Show alignments to all cow chromosomes.