Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F120100.5 |
| Conread position: | 98-369 |
| Cow position: | chr2:53374761-53375033 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 98-377 |
| Cow position: | chr2:50456896-50456623 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 8 |
| Conread position: | 108-340 |
| Cow position: | chr2:39254616-39254382 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 158-368 |
| Cow position: | chr2:324858-324652 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 169-369 |
| Cow position: | chr2:51365485-51365282 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 176-380 |
| Cow position: | chr2:46403226-46403024 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 193-371 |
| Cow position: | chr2:51442938-51442755 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 307-784 |
| Cow position: | chr2:6240280-6240756 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 321-775 |
| Cow position: | chr2:37792782-37792348 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 95, 15 |
| Conread position: | 335-860 |
| Cow position: | chr2:36562421-36562939 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 331 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 373-790 |
| Cow position: | chr2:7900011-7900421 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 373-1171 |
| Cow position: | chr2:49404189-49404986 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 382-860 |
| Cow position: | chr2:30939987-30940451 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 317 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 382-860 |
| Cow position: | chr2:60381208-60381695 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 327 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 131 |
| Conread position: | 383-793 |
| Cow position: | chr2:63294770-63294367 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 385-556 |
| Cow position: | chr2:36359198-36359369 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 385-708 |
| Cow position: | chr2:46467722-46467407 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 385-745 |
| Cow position: | chr2:74394609-74394256 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 385-753 |
| Cow position: | chr2:75678043-75677686 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 31, 150 |
| Conread position: | 385-848 |
| Cow position: | chr2:42335770-42335317 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 385-860 |
| Cow position: | chr2:73189620-73190075 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 317 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 386-819 |
| Cow position: | chr2:26657319-26656893 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 628-857 |
| Cow position: | chr2:34614114-34614333 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 148, 30 |
Show alignments to all cow chromosomes.