Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F120100.5 |
| Conread position: | 91-355 |
| Cow position: | chr28:11027434-11027173 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 83 |
| Conread position: | 98-369 |
| Cow position: | chr28:5401885-5401623 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 98-369 |
| Cow position: | chr28:29448017-29447753 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 115-369 |
| Cow position: | chr28:27126660-27126907 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 126-375 |
| Cow position: | chr28:28435809-28436058 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 52 |
| Conread position: | 364-814 |
| Cow position: | chr28:21927859-21928301 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 378-1151 |
| Cow position: | chr28:6659009-6658235 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 154 |
| Conread position: | 381-1137 |
| Cow position: | chr28:29093647-29092908 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 384-585 |
| Cow position: | chr28:7936190-7936382 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 385-500 |
| Cow position: | chr28:12653083-12652967 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 385-828 |
| Cow position: | chr28:8335020-8335443 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 385-848 |
| Cow position: | chr28:22543420-22543880 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 386-884 |
| Cow position: | chr28:6232986-6232503 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 330 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 387-790 |
| Cow position: | chr28:10652272-10651879 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 139 |
| Conread position: | 404-764 |
| Cow position: | chr28:28876774-28876427 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 415-793 |
| Cow position: | chr28:26005911-26006282 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 184, 45 |
| Conread position: | 506-821 |
| Cow position: | chr28:12652345-12652037 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 9 |
Show alignments to all cow chromosomes.