Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01F120100.5
        

               Conread position:
               95-370
               

               Cow position:
               chr29:32948588-32948869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 155
               

               Conread position:
               114-367
               

               Cow position:
               chr29:26463885-26463638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               132-375
               

               Cow position:
               chr29:32576739-32576490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 44
               

               Conread position:
               353-848
               

               Cow position:
               chr29:4216398-4216878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               382-783
               

               Cow position:
               chr29:6470253-6470643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 48
               

               Conread position:
               384-857
               

               Cow position:
               chr29:11840231-11840701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 152
               

               Conread position:
               386-795
               

               Cow position:
               chr29:34753866-34753461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               389-797
               

               Cow position:
               chr29:129931-130336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               27, 45
               

               Conread position:
               394-848
               

               Cow position:
               chr29:13647105-13647560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               293
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               24, 167
               

               Conread position:
               437-857
               

               Cow position:
               chr29:6770929-6771350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               104, 52
               
Show alignments to all cow chromosomes.