Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F120100.5 |
| Conread position: | 40-367 |
| Cow position: | chr3:31564793-31565118 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 70-390 |
| Cow position: | chr3:5501421-5501752 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 89-366 |
| Cow position: | chr3:25500377-25500100 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 95-371 |
| Cow position: | chr3:15733048-15732767 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 96-368 |
| Cow position: | chr3:3771717-3771449 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 130, 25 |
| Conread position: | 151-371 |
| Cow position: | chr3:8237817-8238038 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 186 |
| Conread position: | 354-622 |
| Cow position: | chr3:52688836-52689101 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 377-821 |
| Cow position: | chr3:3908617-3908185 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 382-848 |
| Cow position: | chr3:52860223-52860682 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 303 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 34, 145 |
| Conread position: | 382-860 |
| Cow position: | chr3:60211850-60211378 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 124 |
| Conread position: | 382-1150 |
| Cow position: | chr3:45776942-45776163 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 383-857 |
| Cow position: | chr3:47298880-47299351 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 385-555 |
| Cow position: | chr3:34897086-34896915 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 385-558 |
| Cow position: | chr3:77441473-77441646 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 141 |
| Conread position: | 385-751 |
| Cow position: | chr3:61275738-61276097 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 385-774 |
| Cow position: | chr3:6879821-6879436 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 385-847 |
| Cow position: | chr3:27880535-27880079 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 176 |
| Conread position: | 385-859 |
| Cow position: | chr3:30927936-30928402 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 387-743 |
| Cow position: | chr3:27631791-27632149 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 398-860 |
| Cow position: | chr3:54344039-54343566 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 311 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 409-796 |
| Cow position: | chr3:83701833-83701451 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 7, 102 |
| Conread position: | 594-796 |
| Cow position: | chr3:56706525-56706324 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 48 |
Show alignments to all cow chromosomes.