Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01F120100.5
        

               Conread position:
               98-371
               

               Cow position:
               chr4:49892776-49893047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               100-368
               

               Cow position:
               chr4:27770228-27770488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               53, 8
               

               Conread position:
               114-371
               

               Cow position:
               chr4:47148228-47148493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               167-367
               

               Cow position:
               chr4:6255885-6256084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               185-363
               

               Cow position:
               chr4:38928308-38928485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 121
               

               Conread position:
               205-370
               

               Cow position:
               chr4:59517729-59517565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               106, 55
               

               Conread position:
               374-774
               

               Cow position:
               chr4:54966165-54966557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               377-536
               

               Cow position:
               chr4:51408548-51408389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 155
               

               Conread position:
               380-565
               

               Cow position:
               chr4:14549427-14549612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               5, 105
               

               Conread position:
               385-848
               

               Cow position:
               chr4:25733948-25734404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               387-848
               

               Cow position:
               chr4:41779160-41778698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               304
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               387-1078
               

               Cow position:
               chr4:59358531-59357856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               702
               

               Alignm identity:
               431
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               30, 56
               
Show alignments to all cow chromosomes.