Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F120100.5 |
| Conread position: | 99-367 |
| Cow position: | chr6:50138039-50138310 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 183-370 |
| Cow position: | chr6:11740287-11740476 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 12, 158 |
| Conread position: | 212-381 |
| Cow position: | chr6:6814910-6815080 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 147, 98 |
| Conread position: | 319-549 |
| Cow position: | chr6:51188982-51189211 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 380-875 |
| Cow position: | chr6:1890005-1889513 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 382-789 |
| Cow position: | chr6:16666166-16666554 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 382-935 |
| Cow position: | chr6:25355809-25356357 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 382-939 |
| Cow position: | chr6:66537571-66538129 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 384-876 |
| Cow position: | chr6:60510165-60510657 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 135 |
| Conread position: | 385-795 |
| Cow position: | chr6:38230698-38231099 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 385-850 |
| Cow position: | chr6:41151491-41151951 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 174 |
| Conread position: | 386-712 |
| Cow position: | chr6:47957535-47957860 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 387-790 |
| Cow position: | chr6:43808698-43808308 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 141 |
| Conread position: | 396-848 |
| Cow position: | chr6:48366520-48366958 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 197, 20 |
| Conread position: | 405-703 |
| Cow position: | chr6:12679462-12679758 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 11, 154 |
| Conread position: | 639-1045 |
| Cow position: | chr6:18575022-18574622 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 118, 48 |
Show alignments to all cow chromosomes.