Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F120100.5 |
| Conread position: | 98-371 |
| Cow position: | chr9:7534888-7535164 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 116-371 |
| Cow position: | chr9:34440057-34439798 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 180-371 |
| Cow position: | chr9:12373336-12373530 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 193-371 |
| Cow position: | chr9:22702419-22702237 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 349-780 |
| Cow position: | chr9:26089509-26089089 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 16 |
| Conread position: | 377-860 |
| Cow position: | chr9:4029382-4028902 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 378-1143 |
| Cow position: | chr9:14359701-14358962 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 187 |
| Conread position: | 381-744 |
| Cow position: | chr9:14962994-14962640 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 35, 145 |
| Conread position: | 384-498 |
| Cow position: | chr9:9633534-9633649 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 385-561 |
| Cow position: | chr9:39991300-39991474 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 133 |
| Conread position: | 385-813 |
| Cow position: | chr9:2006745-2006327 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 214, 31 |
| Conread position: | 385-845 |
| Cow position: | chr9:2112254-2112705 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 385-848 |
| Cow position: | chr9:19076898-19077367 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 385-863 |
| Cow position: | chr9:59423823-59424297 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 175 |
| Conread position: | 386-797 |
| Cow position: | chr9:52568624-52569030 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 273 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 134 |
| Conread position: | 416-848 |
| Cow position: | chr9:34109425-34109003 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 423-860 |
| Cow position: | chr9:26713977-26713547 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 202, 137 |
Show alignments to all cow chromosomes.