Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F120100.5 |
| Conread position: | 37-358 |
| Cow position: | chrX:18869133-18868796 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 87-376 |
| Cow position: | chrX:27354669-27354393 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 98-367 |
| Cow position: | chrX:32010041-32009768 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 98-370 |
| Cow position: | chrX:18136138-18135876 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 113-475 |
| Cow position: | chrX:36646158-36646518 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 129-370 |
| Cow position: | chrX:1697578-1697335 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 136-369 |
| Cow position: | chrX:20701587-20701350 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 117 |
| Conread position: | 162-382 |
| Cow position: | chrX:29867760-29867536 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 170-371 |
| Cow position: | chrX:27677591-27677794 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 198 |
| Conread position: | 197-371 |
| Cow position: | chrX:7887054-7886874 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 206-343 |
| Cow position: | chrX:18939863-18939725 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 382-572 |
| Cow position: | chrX:24140882-24140693 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 170 |
| Conread position: | 384-848 |
| Cow position: | chrX:22133724-22133263 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 385-537 |
| Cow position: | chrX:40115983-40116135 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 385-728 |
| Cow position: | chrX:34986538-34986871 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 385-743 |
| Cow position: | chrX:31033687-31034036 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 385-794 |
| Cow position: | chrX:17672623-17672220 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 385-848 |
| Cow position: | chrX:13050382-13050841 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 387-729 |
| Cow position: | chrX:11742192-11742524 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 396-860 |
| Cow position: | chrX:30372111-30371662 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 430-864 |
| Cow position: | chrX:24374946-24375375 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 206, 105 |
| Conread position: | 595-794 |
| Cow position: | chrX:21272304-21272109 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 12 |
Show alignments to all cow chromosomes.