Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010004F02.5 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-97 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 73 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 91 |
| Conread position: | 1-100 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-100 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-107 |
| Cow position: | |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-109 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-110 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-112 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-112 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-117 |
| Cow position: | |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-131 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 102 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-135 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-100 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-102 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-131 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 2-131 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 3-99 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 3-99 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-99 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-102 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-120 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-135 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 4-99 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-99 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 6-96 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-98 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-99 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-99 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-103 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-107 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 6-139 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 88 |
| Conread position: | 7-117 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 8-131 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 9-98 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 77 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-102 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-99 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-96 |
| Cow position: | |
| Alignm length: | 86 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 13-99 |
| Cow position: | |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-101 |
| Cow position: | |
| Alignm length: | 89 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-103 |
| Cow position: | |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-125 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 78 |
| Conread position: | 13-134 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 110 |
| Conread position: | 14-99 |
| Cow position: | |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-134 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 87, 99 |
| Conread position: | 17-102 |
| Cow position: | |
| Alignm length: | 86 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.