Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-88
Cow position:
Alignm length: 91
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-89
Cow position:
Alignm length: 89
Alignm identity: 84
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-90
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 1-93
Cow position:
Alignm length: 93
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-95
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-95
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-97
Cow position:
Alignm length: 99
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 92

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 18

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 70

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 89
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 1-99
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position:
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-100
Cow position:
Alignm length: 104
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 56

Conread position: 1-101
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-101
Cow position:
Alignm length: 102
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-101
Cow position:
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-101
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-102
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 85

Conread position: 1-102
Cow position:
Alignm length: 103
Alignm identity: 97
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-112
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 106

Conread position: 1-114
Cow position:
Alignm length: 115
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-119
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 106

Conread position: 1-120
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-127
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 93

Conread position: 1-133
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 1-133
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-134
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 100

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-134
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 104

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 94

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 28

Conread position: 1-173
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 98

Conread position: 1-188
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 148

Conread position: 2-88
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-98
Cow position:
Alignm length: 101
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 26

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 88
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 2-103
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-107
Cow position:
Alignm length: 106
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 2-107
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 2-120
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 2-134
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 3-86
Cow position:
Alignm length: 84
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 3-89
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 3-95
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 73

Conread position: 3-95
Cow position:
Alignm length: 93
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-95
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 3-98
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 92

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 4-99
Cow position:
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 4-99
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 5-98
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-97
Cow position:
Alignm length: 92
Alignm identity: 86
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 85
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-112
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 7-99
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 7-107
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 7-134
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 7-134
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 8-99
Cow position:
Alignm length: 92
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-99
Cow position:
Alignm length: 92
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 9-97
Cow position:
Alignm length: 89
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position:
Alignm length: 91
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-102
Cow position:
Alignm length: 96
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 68

Conread position: 9-135
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 11-101
Cow position:
Alignm length: 91
Alignm identity: 81
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-93
Cow position:
Alignm length: 81
Alignm identity: 73
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-97
Cow position:
Alignm length: 85
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-98
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 79
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position:
Alignm length: 89
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position:
Alignm length: 90
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-103
Cow position:
Alignm length: 92
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 13-134
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.