Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-85
Cow position:
Alignm length: 85
Alignm identity: 77
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 79
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position:
Alignm length: 90
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-94
Cow position:
Alignm length: 96
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-96
Cow position:
Alignm length: 96
Alignm identity: 89
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-97
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-97
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 86
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 91

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 64

Conread position: 1-99
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 91

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 89
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 62

Conread position: 1-103
Cow position:
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 1-103
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-104
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-104
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 91

Conread position: 1-107
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 92

Conread position: 1-109
Cow position:
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 91

Conread position: 1-109
Cow position:
Alignm length: 110
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 27

Conread position: 1-110
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 107

Conread position: 1-112
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 106

Conread position: 1-112
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-112
Cow position:
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 5

Conread position: 1-112
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-116
Cow position:
Alignm length: 120
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 94

Conread position: 1-127
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 82

Conread position: 1-128
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 1-132
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 106

Conread position: 1-134
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 103

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-137
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 106

Conread position: 1-146
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 106

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 133

Conread position: 1-237
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 175

Conread position: 2-88
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 2-95
Cow position:
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position:
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 62

Conread position: 2-99
Cow position:
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 2-99
Cow position:
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 2-101
Cow position:
Alignm length: 100
Alignm identity: 89
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-101
Cow position:
Alignm length: 100
Alignm identity: 90
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-95
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-100
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-101
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 3-105
Cow position:
Alignm length: 105
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 98

Conread position: 3-120
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 101

Conread position: 4-98
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 4-126
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 103

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-102
Cow position:
Alignm length: 97
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 7-94
Cow position:
Alignm length: 88
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 95
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 85

Conread position: 7-99
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 7-118
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 12

Conread position: 8-98
Cow position:
Alignm length: 91
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-99
Cow position:
Alignm length: 92
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 8-99
Cow position:
Alignm length: 92
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 9-134
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 10-99
Cow position:
Alignm length: 90
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 13-98
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 88
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-100
Cow position:
Alignm length: 88
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-100
Cow position:
Alignm length: 88
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position:
Alignm length: 89
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 14-102
Cow position:
Alignm length: 89
Alignm identity: 79
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.