Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-95
Cow position: chr18:50082419-50082513 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr18:18957965-18958060 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr18:14815507-14815605 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 1-97
Cow position: chr18:23447256-23447352 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr18:3180246-3180149 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr18:4490044-4490145 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr18:9974498-9974596 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 91

Conread position: 1-98
Cow position: chr18:22121055-22121153 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position: chr18:33606454-33606361 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr18:48407619-48407518 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr18:2270674-2270775 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr18:3115285-3115188 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr18:5711842-5711940 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 13

Conread position: 1-99
Cow position: chr18:7076594-7076491 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr18:11166805-11166707 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr18:13359890-13359790 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 65

Conread position: 1-99
Cow position: chr18:15025504-15025407 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position: chr18:15172858-15172761 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 1-99
Cow position: chr18:18976914-18976812 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-99
Cow position: chr18:19193526-19193621 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-99
Cow position: chr18:20174304-20174402 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr18:21195512-21195611 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 1-99
Cow position: chr18:22790245-22790346 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr18:25647426-25647521 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr18:35076211-35076115 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position: chr18:38985517-38985415 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr18:40759041-40758944 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr18:48290612-48290710 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr18:49161626-49161728 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr18:51212012-51211910 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 95

Conread position: 1-99
Cow position: chr18:56163413-56163315 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr18:14048540-14048439 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 45

Conread position: 1-102
Cow position: chr18:2569631-2569525 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr18:30794260-30794159 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr18:46048587-46048486 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position: chr18:36098027-36097924 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 1-106
Cow position: chr18:24342449-24342345 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 18

Conread position: 1-118
Cow position: chr18:50974752-50974868 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 106, 5

Conread position: 1-120
Cow position: chr18:55589653-55589767 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-131
Cow position: chr18:9007974-9007844 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 63

Conread position: 1-131
Cow position: chr18:16417867-16418001 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-134
Cow position: chr18:35636520-35636656 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 106

Conread position: 1-134
Cow position: chr18:36445264-36445126 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 108

Conread position: 1-137
Cow position: chr18:1144364-1144505 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 79

Conread position: 2-88
Cow position: chr18:43283933-43284019 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr18:15881032-15881129 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr18:56191379-56191476 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-97
Cow position: chr18:12058840-12058747 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 3-98
Cow position: chr18:34527278-34527373 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr18:50382082-50381986 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 3-99
Cow position: chr18:10656269-10656174 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr18:19831121-19831025 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr18:33157645-33157549 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-102
Cow position: chr18:19433535-19433630 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 4-99
Cow position: chr18:2592354-2592445 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 4-99
Cow position: chr18:45395828-45395729 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 5-99
Cow position: chr18:25282731-25282827 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 6-92
Cow position: chr18:24022201-24022115 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr18:36458755-36458662 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr18:45880189-45880282 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr18:49655535-49655443 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 6-125
Cow position: chr18:49543299-49543181 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 6-131
Cow position: chr18:4556563-4556690 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 6-134
Cow position: chr18:39709712-39709584 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 98

Conread position: 7-99
Cow position: chr18:20127283-20127374 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 7-99
Cow position: chr18:24048068-24047976 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-127
Cow position: chr18:21752123-21752006 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 8-103
Cow position: chr18:21768446-21768352 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 9-99
Cow position: chr18:51691650-51691740 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr18:48453507-48453401 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-134
Cow position: chr18:47314480-47314604 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.