Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010004F02.5 |
| Conread position: | 1-84 |
| Cow position: | |
| Alignm length: | 84 |
| Alignm identity: | 76 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-84 |
| Cow position: | |
| Alignm length: | 86 |
| Alignm identity: | 77 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-88 |
| Cow position: | |
| Alignm length: | 88 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | |
| Alignm length: | 92 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-88 |
| Cow position: | |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-94 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-97 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-97 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-97 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 106 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-103 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-103 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-103 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 63 |
| Conread position: | 1-103 |
| Cow position: | |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 1-103 |
| Cow position: | |
| Alignm length: | 108 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-111 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 102 |
| Conread position: | 1-116 |
| Cow position: | |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-122 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 93, 103 |
| Conread position: | 1-128 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-204 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 196, 27 |
| Conread position: | 2-95 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-95 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 2-95 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 2-102 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-109 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 2-111 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 2-134 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 3-93 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 3-99 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-99 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 3-99 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 3-131 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 3-134 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 4-101 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 4-101 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-99 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-98 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 6-99 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-99 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 7-99 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-99 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 7-101 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-134 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 8-95 |
| Cow position: | |
| Alignm length: | 88 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-134 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 95 |
| Conread position: | 9-99 |
| Cow position: | |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 9-99 |
| Cow position: | |
| Alignm length: | 91 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-107 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 11-99 |
| Cow position: | |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-96 |
| Cow position: | |
| Alignm length: | 84 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | |
| Alignm length: | 87 |
| Alignm identity: | 79 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-101 |
| Cow position: | |
| Alignm length: | 89 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-101 |
| Cow position: | |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-134 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 15-103 |
| Cow position: | |
| Alignm length: | 92 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 19-99 |
| Cow position: | |
| Alignm length: | 81 |
| Alignm identity: | 74 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.