Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-91
Cow position:
Alignm length: 91
Alignm identity: 81
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-91
Cow position:
Alignm length: 91
Alignm identity: 80
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position:
Alignm length: 93
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 84
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 96
Alignm identity: 85
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-97
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 36

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 92

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 11

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 94

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 90
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-100
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-100
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position:
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 19

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position:
Alignm length: 108
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 1-103
Cow position:
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 1-103
Cow position:
Alignm length: 104
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 106

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 18

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 2-94
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-95
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 2-96
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 2-129
Cow position:
Alignm length: 129
Alignm identity: 106
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 3-89
Cow position:
Alignm length: 87
Alignm identity: 79
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-92
Cow position:
Alignm length: 90
Alignm identity: 77
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-102
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-103
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 3-113
Cow position:
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 77

Conread position: 3-127
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 3-133
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 3-134
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 101

Conread position: 3-134
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 104

Conread position: 4-101
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 4-112
Cow position:
Alignm length: 109
Alignm identity: 93
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 5-99
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 5-99
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 5-120
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 6-92
Cow position:
Alignm length: 88
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 6-98
Cow position:
Alignm length: 93
Alignm identity: 81
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 6-100
Cow position:
Alignm length: 96
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 40

Conread position: 6-112
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 7-105
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-109
Cow position:
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 12

Conread position: 7-109
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 8-98
Cow position:
Alignm length: 91
Alignm identity: 83
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-99
Cow position:
Alignm length: 92
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-107
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 9-98
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 9-134
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 10-99
Cow position:
Alignm length: 90
Alignm identity: 82
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-96
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-134
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 19-101
Cow position:
Alignm length: 83
Alignm identity: 77
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.