Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010004F02.5 |
| Conread position: | 1-88 |
| Cow position: | |
| Alignm length: | 88 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-89 |
| Cow position: | |
| Alignm length: | 89 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-89 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-93 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-94 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-97 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-100 |
| Cow position: | |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-105 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-105 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-109 |
| Cow position: | |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 1-110 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-120 |
| Cow position: | |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-124 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 104 |
| Conread position: | 1-125 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 1-131 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-135 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-135 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-135 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-135 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 59 |
| Conread position: | 2-93 |
| Cow position: | |
| Alignm length: | 92 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-101 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-102 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 3-98 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-134 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 104 |
| Conread position: | 4-99 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-102 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 5-99 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-92 |
| Cow position: | |
| Alignm length: | 87 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-95 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-95 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 78 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 6-99 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-103 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 6-134 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 66 |
| Conread position: | 7-99 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-99 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 7-100 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 7-100 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-116 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 7-134 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 7-147 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 9-99 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 9-113 |
| Cow position: | |
| Alignm length: | 106 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 13-98 |
| Cow position: | |
| Alignm length: | 86 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-101 |
| Cow position: | |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-102 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-108 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-112 |
| Cow position: | |
| Alignm length: | 89 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.