Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010004F02.5 |
| Conread position: | 1-74 |
| Cow position: | chr3:4861524-4861451 (view UCSC Genome Browser custom track) |
| Alignm length: | 74 |
| Alignm identity: | 71 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-92 |
| Cow position: | chr3:3032230-3032139 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 1-94 |
| Cow position: | chr3:4087333-4087424 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-94 |
| Cow position: | chr3:65800430-65800334 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-95 |
| Cow position: | chr3:36672164-36672262 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-95 |
| Cow position: | chr3:56161142-56161048 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-95 |
| Cow position: | chr3:77271428-77271526 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-96 |
| Cow position: | chr3:39171648-39171744 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-97 |
| Cow position: | chr3:51234262-51234357 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-97 |
| Cow position: | chr3:57764062-57763962 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:2506642-2506743 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:4031805-4031706 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:8393185-8393084 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:9638759-9638855 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:15661865-15661963 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:42177998-42177898 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 1-98 |
| Cow position: | chr3:42483735-42483638 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:45881744-45881647 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:48530472-48530375 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:53150164-53150065 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:59514945-59514849 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:66885199-66885300 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:70565903-70566000 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:79292669-79292572 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | chr3:81471266-81471362 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:210154-210059 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 92, 27 |
| Conread position: | 1-99 |
| Cow position: | chr3:1133260-1133358 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:2216198-2216097 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 1-99 |
| Cow position: | chr3:2674864-2674766 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:17451095-17451197 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:19198516-19198418 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:23471629-23471731 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:27289773-27289674 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:30463331-30463429 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:30907800-30907898 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 1-99 |
| Cow position: | chr3:36656935-36657033 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:44623065-44623160 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:46161010-46161108 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:51033181-51033082 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 1-99 |
| Cow position: | chr3:55124443-55124541 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:58383803-58383705 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:60933251-60933152 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:70895885-70895783 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:71497306-71497409 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:78201106-78201004 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:79208164-79208266 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:79884652-79884749 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:83815954-83816056 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | chr3:84000447-84000349 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-101 |
| Cow position: | chr3:28898388-28898487 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 89 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-101 |
| Cow position: | chr3:48269702-48269598 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-101 |
| Cow position: | chr3:56476515-56476417 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:5097038-5096937 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 1-102 |
| Cow position: | chr3:17952495-17952390 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:18887420-18887313 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:27286064-27285959 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:33253046-33253148 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:53904021-53903920 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 1-102 |
| Cow position: | chr3:59000913-59001011 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:59473945-59473846 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:60597380-60597282 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:61467444-61467339 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:66900907-66901008 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:70899735-70899634 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:72018955-72018853 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-102 |
| Cow position: | chr3:72675927-72675821 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-109 |
| Cow position: | chr3:18607208-18607096 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 1-110 |
| Cow position: | chr3:51578485-51578594 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 1-112 |
| Cow position: | chr3:48900667-48900777 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 1-113 |
| Cow position: | chr3:35283259-35283373 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 1-133 |
| Cow position: | chr3:20997145-20997272 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-133 |
| Cow position: | chr3:31309520-31309653 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 123, 102 |
| Conread position: | 1-134 |
| Cow position: | chr3:2396944-2397080 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-134 |
| Cow position: | chr3:4461654-4461786 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:6403131-6403000 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:7566585-7566716 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:14552713-14552581 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:16547514-16547379 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 1-134 |
| Cow position: | chr3:17222309-17222439 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 1-134 |
| Cow position: | chr3:18763728-18763597 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:22872217-22872349 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:41367149-41367280 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:49650220-49650083 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 96 |
| Conread position: | 1-134 |
| Cow position: | chr3:53113008-53112871 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 1-134 |
| Cow position: | chr3:53572918-53573047 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:65058537-65058405 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 1-134 |
| Cow position: | chr3:70401737-70401606 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:79902338-79902206 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-136 |
| Cow position: | chr3:29887587-29887723 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 1-143 |
| Cow position: | chr3:20802795-20802936 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 90 |
| Conread position: | 1-169 |
| Cow position: | chr3:25691588-25691418 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 1-185 |
| Cow position: | chr3:18854927-18854745 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 20 |
| Conread position: | 2-95 |
| Cow position: | chr3:10347189-10347096 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-99 |
| Cow position: | chr3:10958395-10958491 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 2-99 |
| Cow position: | chr3:60892466-60892369 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-99 |
| Cow position: | chr3:73443253-73443350 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-101 |
| Cow position: | chr3:5100928-5101025 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 2-102 |
| Cow position: | chr3:13577352-13577450 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 2-103 |
| Cow position: | chr3:50329241-50329343 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 2-112 |
| Cow position: | chr3:18066969-18066859 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 2-112 |
| Cow position: | chr3:59604707-59604596 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 3-97 |
| Cow position: | chr3:48241454-48241360 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-98 |
| Cow position: | chr3:62826786-62826885 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-99 |
| Cow position: | chr3:26065838-26065738 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-99 |
| Cow position: | chr3:26920729-26920634 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 3-99 |
| Cow position: | chr3:38691573-38691668 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 3-99 |
| Cow position: | chr3:51012700-51012796 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-99 |
| Cow position: | chr3:55085351-55085447 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-99 |
| Cow position: | chr3:68583170-68583265 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 3-103 |
| Cow position: | chr3:2903457-2903557 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-103 |
| Cow position: | chr3:53046824-53046925 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 3-134 |
| Cow position: | chr3:22907996-22908131 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 105 |
| Conread position: | 3-134 |
| Cow position: | chr3:57022405-57022278 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 4-92 |
| Cow position: | chr3:73708880-73708793 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 4-97 |
| Cow position: | chr3:16890568-16890473 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 4-98 |
| Cow position: | chr3:66292347-66292440 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 4-99 |
| Cow position: | chr3:18459688-18459783 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-99 |
| Cow position: | chr3:80581505-80581408 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 5-95 |
| Cow position: | chr3:37041258-37041168 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-115 |
| Cow position: | chr3:6873413-6873523 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 99 |
| Conread position: | 6-98 |
| Cow position: | chr3:3985160-3985068 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-99 |
| Cow position: | chr3:29596224-29596130 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 6-99 |
| Cow position: | chr3:31276276-31276367 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 6-99 |
| Cow position: | chr3:49731808-49731900 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 6-131 |
| Cow position: | chr3:30179913-30179788 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 87, 98 |
| Conread position: | 6-134 |
| Cow position: | chr3:29172213-29172086 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 6-151 |
| Cow position: | chr3:5416397-5416544 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 7-95 |
| Cow position: | chr3:16333635-16333547 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-99 |
| Cow position: | chr3:13329944-13330035 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 7-101 |
| Cow position: | chr3:11640263-11640169 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-102 |
| Cow position: | chr3:12712094-12712189 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-127 |
| Cow position: | chr3:72243-72125 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 8-119 |
| Cow position: | chr3:47284665-47284556 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 8-122 |
| Cow position: | chr3:30701152-30701037 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 8-185 |
| Cow position: | chr3:81277875-81278049 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 96 |
| Conread position: | 13-93 |
| Cow position: | chr3:5374156-5374076 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 73 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-93 |
| Cow position: | chr3:45534477-45534557 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 75 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-95 |
| Cow position: | chr3:50099317-50099235 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 75 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-98 |
| Cow position: | chr3:81940074-81939989 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-98 |
| Cow position: | chr3:83921021-83920936 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | chr3:19006490-19006404 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 79 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | chr3:25690608-25690522 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | chr3:29813066-29812981 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-99 |
| Cow position: | chr3:65020157-65020071 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | chr3:71430389-71430475 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-101 |
| Cow position: | chr3:2335105-2335018 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-101 |
| Cow position: | chr3:54740049-54740136 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-101 |
| Cow position: | chr3:74621174-74621262 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-102 |
| Cow position: | chr3:13118168-13118079 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-102 |
| Cow position: | chr3:49230833-49230745 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-102 |
| Cow position: | chr3:52147857-52147946 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-120 |
| Cow position: | chr3:4457253-4457359 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 13-127 |
| Cow position: | chr3:76923028-76923143 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 13-134 |
| Cow position: | chr3:38347024-38346906 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 15-98 |
| Cow position: | chr3:15228998-15229081 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-101 |
| Cow position: | chr3:17331588-17331503 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.