Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position:
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 1-96
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1-96
Cow position:
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 88
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 104
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 89
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 1-99
Cow position:
Alignm length: 104
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 18

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 102
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 92
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 92
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 1-100
Cow position:
Alignm length: 100
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 90
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 89
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 96

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 94
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-102
Cow position:
Alignm length: 104
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-107
Cow position:
Alignm length: 108
Alignm identity: 94
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 1-107
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-107
Cow position:
Alignm length: 110
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 48

Conread position: 1-107
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 1-110
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 103

Conread position: 1-112
Cow position:
Alignm length: 112
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-113
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-116
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-127
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 102

Conread position: 1-131
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 1-132
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 105

Conread position: 1-133
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 106

Conread position: 1-133
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 107

Conread position: 1-134
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 105

Conread position: 1-134
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 118, 71

Conread position: 2-97
Cow position:
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position:
Alignm length: 102
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 2-102
Cow position:
Alignm length: 105
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 93

Conread position: 2-104
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 2-107
Cow position:
Alignm length: 107
Alignm identity: 93
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 102

Conread position: 2-134
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 103

Conread position: 3-95
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-97
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 3-98
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position:
Alignm length: 96
Alignm identity: 87
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position:
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 3-103
Cow position:
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 25

Conread position: 3-131
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 3-131
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 116

Conread position: 3-134
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 3-134
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 4-99
Cow position:
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 4-99
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 4-99
Cow position:
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 4-99
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 5-108
Cow position:
Alignm length: 105
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 6-87
Cow position:
Alignm length: 82
Alignm identity: 75
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-97
Cow position:
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position:
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 6-99
Cow position:
Alignm length: 96
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 87

Conread position: 6-102
Cow position:
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 7-96
Cow position:
Alignm length: 90
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 7-96
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 81
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-102
Cow position:
Alignm length: 100
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 88

Conread position: 7-102
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-131
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 97

Conread position: 7-136
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 7-168
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 12

Conread position: 8-98
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-98
Cow position:
Alignm length: 93
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 8-98
Cow position:
Alignm length: 91
Alignm identity: 81
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-103
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-101
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 10

Conread position: 9-134
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 10-99
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-99
Cow position:
Alignm length: 89
Alignm identity: 79
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-121
Cow position:
Alignm length: 111
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 13-98
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 79
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-99
Cow position:
Alignm length: 85
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Show alignments to all cow chromosomes.