Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 79
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position:
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-92
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 90
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 89

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 92
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 28

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 91
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 92
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position:
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-107
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-110
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 1-112
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 106

Conread position: 1-112
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 106

Conread position: 1-120
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 1-120
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-129
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 46

Conread position: 1-131
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 79

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 106

Conread position: 1-134
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 5

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 104

Conread position: 1-134
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 96

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 94

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-135
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 91

Conread position: 1-135
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 129

Conread position: 1-137
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 106

Conread position: 1-143
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 75

Conread position: 1-166
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 115

Conread position: 2-95
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-95
Cow position:
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-97
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 2-102
Cow position:
Alignm length: 101
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 2-123
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 2-134
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 2-134
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 3-97
Cow position:
Alignm length: 95
Alignm identity: 88
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 89
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 88
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 3-101
Cow position:
Alignm length: 99
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 3-102
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 3-134
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-183
Cow position:
Alignm length: 182
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 4-101
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 4-102
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 4-103
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 15

Conread position: 4-103
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-131
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 85
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 6-99
Cow position:
Alignm length: 95
Alignm identity: 88
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 6-134
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 6-134
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 97

Conread position: 7-93
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 7-95
Cow position:
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-95
Cow position:
Alignm length: 89
Alignm identity: 80
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-95
Cow position:
Alignm length: 89
Alignm identity: 81
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-97
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-97
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-103
Cow position:
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 7-131
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 100

Conread position: 7-134
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 97

Conread position: 8-101
Cow position:
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 8-102
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 83

Conread position: 8-134
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 9-99
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-134
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 95

Conread position: 10-99
Cow position:
Alignm length: 90
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 11-99
Cow position:
Alignm length: 89
Alignm identity: 82
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-112
Cow position:
Alignm length: 100
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 15-98
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.