Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-79
Cow position:
Alignm length: 79
Alignm identity: 72
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 92
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-92
Cow position:
Alignm length: 96
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 1-95
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 1-97
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-97
Cow position:
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 94

Conread position: 1-97
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 20

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 94

Conread position: 1-98
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 69

Conread position: 1-98
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 18

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 89
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 92
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 88
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 93
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 18

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 94

Conread position: 1-100
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 89
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-101
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 88
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 91
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-103
Cow position:
Alignm length: 104
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 78

Conread position: 1-107
Cow position:
Alignm length: 111
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-107
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-110
Cow position:
Alignm length: 114
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 48

Conread position: 1-110
Cow position:
Alignm length: 111
Alignm identity: 96
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 90, 103

Conread position: 1-112
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 106

Conread position: 1-112
Cow position:
Alignm length: 113
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 100, 12

Conread position: 1-112
Cow position:
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 106

Conread position: 1-120
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-127
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-134
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 104

Conread position: 1-134
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 103

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 60

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-135
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 2-98
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 88
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-102
Cow position:
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-102
Cow position:
Alignm length: 101
Alignm identity: 91
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-131
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 54

Conread position: 2-133
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 15

Conread position: 2-137
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 101

Conread position: 3-95
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 3-96
Cow position:
Alignm length: 94
Alignm identity: 86
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-96
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position:
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 3-99
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 3-99
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 3-99
Cow position:
Alignm length: 98
Alignm identity: 89
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 3-102
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 3-119
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 3-131
Cow position:
Alignm length: 131
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 100

Conread position: 3-134
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 4-97
Cow position:
Alignm length: 94
Alignm identity: 87
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 4-99
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 4-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 4-136
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 103, 85

Conread position: 5-95
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position:
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-134
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 6-134
Cow position:
Alignm length: 129
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 6-182
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 97

Conread position: 7-95
Cow position:
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 84
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-183
Cow position:
Alignm length: 178
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 9-99
Cow position:
Alignm length: 91
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-99
Cow position:
Alignm length: 90
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 10-115
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 82

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-100
Cow position:
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-132
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 14-132
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 15-99
Cow position:
Alignm length: 85
Alignm identity: 75
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-98
Cow position:
Alignm length: 82
Alignm identity: 77
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 19-99
Cow position:
Alignm length: 81
Alignm identity: 74
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-134
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.