Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-83
Cow position:
Alignm length: 83
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-86
Cow position:
Alignm length: 86
Alignm identity: 78
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-91
Cow position:
Alignm length: 91
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-93
Cow position:
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1-93
Cow position:
Alignm length: 93
Alignm identity: 84
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 97
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 86
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 85
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 88
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 96
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 1-96
Cow position:
Alignm length: 100
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 63

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 90
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 94

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 89
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 93

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 106
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 65

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position:
Alignm length: 104
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 1-99
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 89

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 92
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 67

Conread position: 1-100
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-100
Cow position:
Alignm length: 100
Alignm identity: 89
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 89
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position:
Alignm length: 106
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 64

Conread position: 1-102
Cow position:
Alignm length: 106
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 1-102
Cow position:
Alignm length: 106
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-102
Cow position:
Alignm length: 105
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 92

Conread position: 1-107
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 106

Conread position: 1-108
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-109
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 108

Conread position: 1-112
Cow position:
Alignm length: 112
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-112
Cow position:
Alignm length: 112
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-119
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 97

Conread position: 1-124
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 106

Conread position: 1-127
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-127
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 1-131
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-131
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-133
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 39

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 106

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 103

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-186
Cow position:
Alignm length: 186
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 2-88
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-94
Cow position:
Alignm length: 93
Alignm identity: 82
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-95
Cow position:
Alignm length: 98
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 62

Conread position: 2-98
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position:
Alignm length: 103
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 17

Conread position: 2-99
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 2-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 2-118
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 2-128
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 3-96
Cow position:
Alignm length: 98
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 81

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 89
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 101
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 3-103
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 92

Conread position: 3-104
Cow position:
Alignm length: 106
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 92

Conread position: 3-134
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 4-98
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 29

Conread position: 4-98
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 4-101
Cow position:
Alignm length: 98
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 4-107
Cow position:
Alignm length: 104
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 4-110
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 4-134
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 37

Conread position: 6-95
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 6-102
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 6-103
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 6-107
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-127
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 7-96
Cow position:
Alignm length: 91
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 7-102
Cow position:
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 7-109
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 8-104
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-102
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-134
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 9-134
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 10-99
Cow position:
Alignm length: 92
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 10-99
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 13-99
Cow position:
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 88
Alignm identity: 80
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-132
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 13-134
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 13-134
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 91

Conread position: 13-146
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 14-134
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 14-134
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 90

Conread position: 19-98
Cow position:
Alignm length: 80
Alignm identity: 73
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-107
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 21-134
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.