Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010004F02.5 |
| Conread position: | 1-88 |
| Cow position: | |
| Alignm length: | 88 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-89 |
| Cow position: | |
| Alignm length: | 91 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-92 |
| Cow position: | |
| Alignm length: | 92 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-95 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-96 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-97 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-97 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-97 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-98 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-100 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-100 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 93 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-101 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-102 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-103 |
| Cow position: | |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 1-103 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-108 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 1-109 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-109 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-112 |
| Cow position: | |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 103 |
| Conread position: | 1-113 |
| Cow position: | |
| Alignm length: | 116 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 1-114 |
| Cow position: | |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 12, 103 |
| Conread position: | 1-116 |
| Cow position: | |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 1-127 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 1-131 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 1-132 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-133 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 96, 101 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 101 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 1-134 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 123, 102 |
| Conread position: | 2-96 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 2-97 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 79 |
| Conread position: | 2-98 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-99 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 2-101 |
| Cow position: | |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-102 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 2-102 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 2-112 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 2-134 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 3-94 |
| Cow position: | |
| Alignm length: | 92 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-95 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-96 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 3-98 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-98 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 3-99 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-99 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-97 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-99 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-99 |
| Cow position: | |
| Alignm length: | 96 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-99 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 4-100 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-102 |
| Cow position: | |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 4-109 |
| Cow position: | |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-94 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-134 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 6-99 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-99 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 6-115 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 6-131 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 98 |
| Conread position: | 7-95 |
| Cow position: | |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-96 |
| Cow position: | |
| Alignm length: | 90 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-99 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 7-100 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-127 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 84 |
| Conread position: | 8-99 |
| Cow position: | |
| Alignm length: | 92 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 8-99 |
| Cow position: | |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 9-102 |
| Cow position: | |
| Alignm length: | 94 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-105 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 13-95 |
| Cow position: | |
| Alignm length: | 83 |
| Alignm identity: | 74 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-96 |
| Cow position: | |
| Alignm length: | 84 |
| Alignm identity: | 75 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-133 |
| Cow position: | |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 13-134 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.