Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-86
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-90
Cow position:
Alignm length: 93
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 1-93
Cow position:
Alignm length: 93
Alignm identity: 84
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 89
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-95
Cow position:
Alignm length: 95
Alignm identity: 86
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 1-96
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 1-97
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-98
Cow position:
Alignm length: 102
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 1-98
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 93

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 91

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 90
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 89
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 12

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 92
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 74

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 88
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 90
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 33

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 67

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-100
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-101
Cow position:
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 1-101
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-104
Cow position:
Alignm length: 108
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 92

Conread position: 1-107
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-107
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-107
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-107
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-109
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 106

Conread position: 1-109
Cow position:
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-109
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-110
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 6

Conread position: 1-111
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 1-112
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-120
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-127
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 78

Conread position: 1-127
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 1-128
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-131
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-133
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 107

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 19

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 1-134
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 103

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 93

Conread position: 1-134
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 108

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 106

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 113
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 2-99
Cow position:
Alignm length: 102
Alignm identity: 91
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 2-107
Cow position:
Alignm length: 106
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 2-134
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 3-96
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 92
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 3-107
Cow position:
Alignm length: 105
Alignm identity: 92
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 3-112
Cow position:
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-134
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 92

Conread position: 4-98
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 4-99
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-107
Cow position:
Alignm length: 104
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 4-134
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 5-99
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 5-100
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 5-133
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 5-134
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position:
Alignm length: 95
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 37

Conread position: 6-99
Cow position:
Alignm length: 94
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 6-134
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 6-152
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 97

Conread position: 7-86
Cow position:
Alignm length: 80
Alignm identity: 74
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-98
Cow position:
Alignm length: 92
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-98
Cow position:
Alignm length: 92
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position:
Alignm length: 93
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 7-99
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 12

Conread position: 7-110
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 7-131
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-98
Cow position:
Alignm length: 91
Alignm identity: 81
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-99
Cow position:
Alignm length: 92
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-297
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 91

Conread position: 9-98
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 9-98
Cow position:
Alignm length: 90
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 9-99
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 9-101
Cow position:
Alignm length: 93
Alignm identity: 84
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 13-95
Cow position:
Alignm length: 83
Alignm identity: 75
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 13-98
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position:
Alignm length: 90
Alignm identity: 77
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-134
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 14-103
Cow position:
Alignm length: 91
Alignm identity: 81
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 14-130
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 17-89
Cow position:
Alignm length: 73
Alignm identity: 71
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.