Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010004F02.5 |
| Conread position: | 1-86 |
| Cow position: | chrX:17725859-17725774 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-90 |
| Cow position: | chrX:17908396-17908488 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-93 |
| Cow position: | chrX:26285864-26285772 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-93 |
| Cow position: | chrX:26875998-26876089 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-94 |
| Cow position: | chrX:7497128-7497035 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-94 |
| Cow position: | chrX:21665709-21665802 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-94 |
| Cow position: | chrX:34543671-34543579 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-95 |
| Cow position: | chrX:6640010-6639916 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-95 |
| Cow position: | chrX:7718743-7718645 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-95 |
| Cow position: | chrX:18695035-18695129 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-96 |
| Cow position: | chrX:11073303-11073399 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-96 |
| Cow position: | chrX:46429973-46430068 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-97 |
| Cow position: | chrX:10916634-10916543 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-97 |
| Cow position: | chrX:13177580-13177676 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-97 |
| Cow position: | chrX:20752139-20752048 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-97 |
| Cow position: | chrX:29542334-29542430 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-98 |
| Cow position: | chrX:678679-678780 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-98 |
| Cow position: | chrX:6563396-6563300 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-98 |
| Cow position: | chrX:20887761-20887856 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-98 |
| Cow position: | chrX:26625788-26625889 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-98 |
| Cow position: | chrX:27174880-27174782 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-98 |
| Cow position: | chrX:33466496-33466401 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-98 |
| Cow position: | chrX:35609873-35609774 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:619119-619221 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:1514517-1514614 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:2523841-2523943 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:4043962-4044063 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 1-99 |
| Cow position: | chrX:8797136-8797035 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 1-99 |
| Cow position: | chrX:9416808-9416906 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:10437778-10437878 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:11856313-11856216 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:12979942-12980044 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:13868578-13868481 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:13912964-13912866 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 1-99 |
| Cow position: | chrX:14900837-14900934 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:15147304-15147399 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:15485742-15485841 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:20697722-20697821 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:21795380-21795283 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:23514130-23514231 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 1-99 |
| Cow position: | chrX:23970269-23970176 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:25238061-25237964 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:27394129-27394227 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:29509559-29509657 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:31442937-31443034 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:32128098-32128193 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 1-99 |
| Cow position: | chrX:32870898-32870999 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 1-99 |
| Cow position: | chrX:35268772-35268677 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:35542780-35542678 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:37843605-37843507 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:38963990-38963896 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:42247295-42247397 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:42855297-42855195 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:43527388-43527290 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chrX:47344183-47344081 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-100 |
| Cow position: | chrX:877139-877237 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-101 |
| Cow position: | chrX:4632967-4633066 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-101 |
| Cow position: | chrX:21593172-21593068 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-101 |
| Cow position: | chrX:42499142-42499244 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-101 |
| Cow position: | chrX:48684342-48684438 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-102 |
| Cow position: | chrX:42492630-42492730 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-103 |
| Cow position: | chrX:18812139-18812040 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-104 |
| Cow position: | chrX:41238477-41238581 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 1-107 |
| Cow position: | chrX:11633563-11633458 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-107 |
| Cow position: | chrX:36975834-36975729 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-107 |
| Cow position: | chrX:37489611-37489509 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-107 |
| Cow position: | chrX:38006879-38006989 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-109 |
| Cow position: | chrX:2467768-2467657 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 1-109 |
| Cow position: | chrX:27680284-27680181 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-109 |
| Cow position: | chrX:38967535-38967428 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-110 |
| Cow position: | chrX:19019227-19019335 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 1-111 |
| Cow position: | chrX:24105511-24105400 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-112 |
| Cow position: | chrX:34238605-34238497 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-120 |
| Cow position: | chrX:7382208-7382090 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-127 |
| Cow position: | chrX:21663197-21663069 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 1-127 |
| Cow position: | chrX:41743796-41743673 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-128 |
| Cow position: | chrX:17794870-17794744 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-131 |
| Cow position: | chrX:25283265-25283390 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-133 |
| Cow position: | chrX:22821936-22821802 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 1-134 |
| Cow position: | chrX:8899913-8899777 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 1-134 |
| Cow position: | chrX:14924884-14924753 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-134 |
| Cow position: | chrX:16531882-16531752 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-134 |
| Cow position: | chrX:20582914-20582783 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 1-134 |
| Cow position: | chrX:28111391-28111260 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-134 |
| Cow position: | chrX:31949049-31949178 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-134 |
| Cow position: | chrX:34401883-34401750 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 1-134 |
| Cow position: | chrX:34441567-34441697 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-134 |
| Cow position: | chrX:34502807-34502673 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 1-134 |
| Cow position: | chrX:38439363-38439226 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 1-134 |
| Cow position: | chrX:40183461-40183597 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 1-134 |
| Cow position: | chrX:40452324-40452460 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 1-134 |
| Cow position: | chrX:40647862-40647731 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 2-99 |
| Cow position: | chrX:33519505-33519404 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-107 |
| Cow position: | chrX:4942870-4942970 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-134 |
| Cow position: | chrX:9997451-9997580 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-96 |
| Cow position: | chrX:39558464-39558557 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-99 |
| Cow position: | chrX:22074683-22074587 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-99 |
| Cow position: | chrX:23091764-23091668 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-99 |
| Cow position: | chrX:33020368-33020273 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 3-107 |
| Cow position: | chrX:13265737-13265840 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 3-112 |
| Cow position: | chrX:42470058-42470162 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-134 |
| Cow position: | chrX:42874864-42874731 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 4-98 |
| Cow position: | chrX:17497977-17497884 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 4-99 |
| Cow position: | chrX:37574738-37574643 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-99 |
| Cow position: | chrX:45412773-45412868 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-107 |
| Cow position: | chrX:33855351-33855453 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-134 |
| Cow position: | chrX:32020240-32020369 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 5-99 |
| Cow position: | chrX:4269186-4269281 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 5-100 |
| Cow position: | chrX:48195159-48195255 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-133 |
| Cow position: | chrX:41167084-41167208 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 5-134 |
| Cow position: | chrX:23497784-23497910 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 6-99 |
| Cow position: | chrX:2206664-2206757 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-99 |
| Cow position: | chrX:29193885-29193795 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 6-99 |
| Cow position: | chrX:35413508-35413419 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-134 |
| Cow position: | chrX:28846999-28847126 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 6-152 |
| Cow position: | chrX:42339056-42339202 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 131, 97 |
| Conread position: | 7-86 |
| Cow position: | chrX:917493-917572 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 74 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-98 |
| Cow position: | chrX:27509141-27509232 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-98 |
| Cow position: | chrX:45787533-45787442 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-99 |
| Cow position: | chrX:19015317-19015229 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-99 |
| Cow position: | chrX:27432041-27432132 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 7-110 |
| Cow position: | chrX:32623461-32623359 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 7-131 |
| Cow position: | chrX:42086740-42086616 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-98 |
| Cow position: | chrX:27176442-27176532 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-99 |
| Cow position: | chrX:33205114-33205205 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-297 |
| Cow position: | chrX:16324086-16324373 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 116, 91 |
| Conread position: | 9-98 |
| Cow position: | chrX:151777-151689 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 9-98 |
| Cow position: | chrX:616530-616618 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 9-99 |
| Cow position: | chrX:19690094-19690005 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 9-101 |
| Cow position: | chrX:38549325-38549233 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-124 |
| Cow position: | chrX:42461870-42461982 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 13-95 |
| Cow position: | chrX:29601960-29602040 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 75 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 13-98 |
| Cow position: | chrX:17231607-17231522 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | chrX:17662724-17662810 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | chrX:26440907-26440993 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-99 |
| Cow position: | chrX:42381227-42381313 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-102 |
| Cow position: | chrX:22115409-22115498 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 77 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-134 |
| Cow position: | chrX:23563924-23564044 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 14-103 |
| Cow position: | chrX:27446560-27446470 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 14-130 |
| Cow position: | chrX:7721856-7721741 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 17-89 |
| Cow position: | chrX:39938654-39938726 (view UCSC Genome Browser custom track) |
| Alignm length: | 73 |
| Alignm identity: | 71 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.