Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR010005B06.5
        

               Conread position:
               64-430
               

               Cow position:
               chrX:16926212-16925834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               104-419
               

               Cow position:
               chrX:43837156-43837466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               35, 92
               

               Conread position:
               105-318
               

               Cow position:
               chrX:86080-86301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 157
               

               Conread position:
               105-408
               

               Cow position:
               chrX:38943335-38943023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 154
               

               Conread position:
               149-318
               

               Cow position:
               chrX:32583119-32582958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               90, 103
               

               Conread position:
               173-417
               

               Cow position:
               chrX:1133074-1133322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 198
               

               Conread position:
               249-428
               

               Cow position:
               chrX:799763-799582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 0
               
Show alignments to all cow chromosomes.